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Links from GEO DataSets

Items: 4

1.

Gene expression analysis of Hodgkin and non-Hodgkin lymphoma cell lines

(Submitter supplied) Genomewide gene expression analysis of lymphoid cell lines of Hodgkin, non-Hodgkin and acute leukemia origin
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS4179
Platform:
GPL570
15 Samples
Download data: CEL
Series
Accession:
GSE20011
ID:
200020011
2.
Full record GDS4179

Hodgkin and non-Hodgkin lymphoma cell lines

Analysis of lymphoid cell lines of Hodgkin, non-Hodgkin, and acute leukemia origin. Aberrant NOTCH activity is involved in the pathogenesis of B cell-derived lymphomas. Results provide insight into the molecular basis of deregulated NOTCH activity.
Organism:
Homo sapiens
Type:
Expression profiling by array, transformed count, 9 cell line, 4 disease state sets
Platform:
GPL570
Series:
GSE20011
15 Samples
Download data: CEL
DataSet
Accession:
GDS4179
ID:
4179
3.

Sequence dependency and regulatory function of dimeric NOTCH1/RBPJ complexes on coding and non-coding transcription in T-lymphoblastic leukemia

(Submitter supplied) NOTCH/RBPJ/MAML ternary transcriptional complex binds to regulatory element and drives gene expression. The complex can function as monomer and dimer. How dimeric complexes regulate gene expression in human cancer is not well studied. Here, we integrate genomic data sets and analyze Notch dimeric complexes-regulated transcriptome and cis-regulatory elements. A subset of coding and non-coding RNA is Notch dimeric complexes-associated. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL11154
16 Samples
Download data: TXT
4.

Epigenetic landscapes in wild-type and dimer-mutant Notch regulated T-LL cells

(Submitter supplied) NOTCH/RBPJ/MAML ternary transcriptional complex binds to regulatory element and drives gene expression. The complex can function as monomer and dimer. How dimeric complexes regulate gene expression in human cancer is not well studied. Here, we integrate genomic data sets and analyze Notch dimeric complexes-regulated transcriptome and cis-regulatory elements. A subset of coding and non-coding RNA is Notch dimeric complexes-associated. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11154
4 Samples
Download data: BW
Series
Accession:
GSE72175
ID:
200072175
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Supplemental Content

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