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Links from GEO DataSets

Items: 10

1.

Gene expression profiles of THP1 monocyte cells following Echinaforce treatment

(Submitter supplied) Until today, natural Echinacea purpurea extracts are widely used to prevent and treat respiratory trac infections. Although its immunomodulatory effects have already been demonstrated by several studies, the molecular mechanisms involved are not yet completely understood. In this study, we applied a systems biology approach by integrating transcriptome, kinome and methylome profiles of THP-1 monocyte cells treated with Echinaforce®, a commercial standardized ethanolic tincture of Echinacea purpurea. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
12 Samples
Download data: TXT
Series
Accession:
GSE117902
ID:
200117902
2.

Echinacea purpurea elicits anti-viral response in THP-1 monocytes through activation of interferon, MAPK and NF-κB signaling pathways and DNA hypermethylation of repeat elements

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; Methylation profiling by genome tiling array
Platforms:
GPL21145 GPL10558
24 Samples
Download data
Series
Accession:
GSE117904
ID:
200117904
3.

DNA methylation profiles of THP1 monocyte cells following Echinaforce treatment

(Submitter supplied) Until today, natural Echinacea purpurea extracts are widely used to prevent and treat respiratory trac infections. Although its immunomodulatory effects have already been demonstrated by several studies, the molecular mechanisms involved are not yet completely understood. In this study, we applied a systems biology approach by integrating transcriptome, kinome and methylome profiles of THP-1 monocyte cells treated with Echinaforce®, a commercial standardized ethanolic tincture of Echinacea purpurea. more...
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL21145
12 Samples
Download data: TXT
Series
Accession:
GSE117903
ID:
200117903
4.

Differential interferon-α immune signatures prevent SARS-CoV-2 infection

(Submitter supplied) Type 1 interferons (IFN-I) exert pleiotropic biological effects during viral infections, balancing virus control and immune-mediated pathology and have been successfully employed for the treatment of viral diseases. In humans, there are twelve IFN-alpha (α) subtypes, which activate downstream signalling cascades and result in a distinct pattern of immune responses and differential antiviral responses. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24676
60 Samples
Download data: XLSX
Series
Accession:
GSE189613
ID:
200189613
5.

CCR2-dependent monocyte-derived cells restrict SARS-CoV-2 infection

(Submitter supplied) SARS-CoV-2 has caused a historic pandemic of respiratory disease (COVID-19) and current evidence suggests severe disease is associated with dysregulated immunity within the respiratory tract1,2. However, the innate immune mechanisms that mediate protection during COVID-19 are not well defined. Here we characterize a mouse model of SARS-CoV-2 infection and find that early CCR2-dependent infiltration of monocytes restricts viral burden in the lung. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
8 Samples
Download data: MTX, TSV
Series
Accession:
GSE186360
ID:
200186360
6.

Hydroxychloroquine inhibits trained immunity

(Submitter supplied) We demonstrate that hydroxychloroquine inhibits trained immunity at the functional and epigenetic level and is accompanied by reduced expression of interferon-stimulated genes. Trained immunity comprises a functional adaptation induced by epigenetic reprogramming which facilitates the anti-viral innate immune response.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18573
47 Samples
Download data: TSV
7.

Human dendritic cells treated with Echinacea purpurea phytocompounds

(Submitter supplied) This study investigated the specific and differential gene expression in human immature DCs (iDCs) in response to treatment with a butanol fraction containing defined bioactive phytocompounds extracted from stems and leaves of Echinacea purpurea
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS3428
Platform:
GPL96
9 Samples
Download data: CEL, CHP
Series
Accession:
GSE12259
ID:
200012259
8.
Full record GDS3428

Immature dendritic cell response to butanol fraction of Echinacea purpurea: time course

Analysis of immature dendritic cell lines (iDCs) treated with the butanol-fraction of stems and leaves of E. purpurea [BF/S+L/Ep] containing defined bioactive phytocompounds. Results provide insight into molecular mechanisms underlying the immune-modulatory activities induced by the phytocompounds.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 4 agent, 4 time sets
Platform:
GPL96
Series:
GSE12259
9 Samples
Download data: CEL, CHP
9.

Epigenomics of nasal mucosa in children with acute respiratory illness

(Submitter supplied) NOT PROVIDED; REQUESTED
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL24676
20 Samples
Download data: TSV
Series
Accession:
GSE168254
ID:
200168254
10.

Lifespan charactarization of the nasal mucosa

(Submitter supplied) Single-cell RNA-sequencing of the nasal mucosa across the lifespan
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24676
23 Samples
Download data: H5
Series
Accession:
GSE162864
ID:
200162864
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