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Links from GEO DataSets

Items: 7

1.

The Position Beta57 of IAg7 Controls the Early Anti-Insulin Response and Onset of Diabetes in NOD mice to Link MHC and Disease [RT-PCR]

(Submitter supplied) Abstract- The class II region of the Major Histocompatibility locus is the main contributor to the genetic susceptibility to type 1 diabetes (T1D). The loss of an aspartic acid at position 57 of diabetogenic HLA-DQ8 chains supports this association; it influences the recognition of peptides in the context of HLA-DQ8, and I-Ag7 using a mechanism termed the P9 switch. Here, we built register-specific insulin MHC tetramers, Ins12-20 and Ins13-21, to examine anti-insulin CD4 T cell responses during the early pre-diabetic phase of disease in mice. more...
Organism:
Mus musculus
Type:
Expression profiling by RT-PCR
Platform:
GPL26927
1829 Samples
Download data: CSV
Series
Accession:
GSE134440
ID:
200134440
2.

The Position Beta57 of IAg7 Controls the Early Anti-Insulin Response and Onset of Diabetes in NOD mice to Link MHC and Disease

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by RT-PCR; Expression profiling by high throughput sequencing
Platforms:
GPL26927 GPL16417
1845 Samples
Download data: XLS, XLSX
Series
Accession:
GSE134885
ID:
200134885
3.

The Position Beta57 of IAg7 Controls the Early Anti-Insulin Response and Onset of Diabetes in NOD mice to Link MHC and Disease [sequencing]

(Submitter supplied) Abstract- The class II region of the Major Histocompatibility locus is the main contributor to the genetic susceptibility to type 1 diabetes (T1D). The loss of an aspartic acid at position 57 of diabetogenic HLA-DQ8 chains supports this association; it influences the recognition of peptides in the context of HLA-DQ8, and I-Ag7 using a mechanism termed the P9 switch. Here, we built register-specific insulin MHC tetramers, Ins12-20 and Ins13-21, to examine anti-insulin CD4 T cell responses during the early pre-diabetic phase of disease in mice. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16417
16 Samples
Download data: XLS, XLSX
Series
Accession:
GSE134883
ID:
200134883
4.

Genome-wide transcriptional analyses of islet-specific CD4+ T cells identify Idd9 genes controlling diabetogenic T cell function

(Submitter supplied) Analysis of gene expression levels in ex-vivo and p79-stimulated splenic CD4+ T cells.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL14828
12 Samples
Download data: TXT
Series
Accession:
GSE64674
ID:
200064674
5.

Comparison of gene expression in NOD versus NOD.NOR-Chr4 (NR4) splenic B cells.

(Submitter supplied) Type 1 Diabetes (T1D) in humans and the non-obese diabetic (NOD) mouse model results from autoreactive T cell destruction of pancreatic beta cells. A pathogenic role for B lymphocytes (B cells) in T1D first became evident when NOD mice made deficient in this population through introduction of an inactivated Igµ heavy chain gene (NOD.Igµnull) or chronic treatment with anti-IgM antibodies were strongly protected from disease. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS4340
Platform:
GPL1261
11 Samples
Download data: CEL
Series
Accession:
GSE37294
ID:
200037294
6.
Full record GDS4340

Non-obese diabetic (NOD) and disease-resistant NOD.NOR-Chr4 models: splenic B cells

Analysis of anti-IgM-F(ab’)2 fragment-stimulated, splenic B cells from non-obese diabetic (NOD) or NR4 (NOD background with Chromosome 4, type 1 diabetes (T1D)-resistance alleles) females. Results provide insight into the molecular mechanisms underlying NOD and NR4 diabetogenic activity.
Organism:
Mus musculus
Type:
Expression profiling by array, transformed count, 2 agent, 2 strain sets
Platform:
GPL1261
Series:
GSE37294
11 Samples
Download data: CEL
7.

Regulatory T cells targeting a pathogenic MHC class II: Insulin peptide epitope postpone spontaneous autoimmune diabetes

(Submitter supplied) In spontaneous type 1 diabetes (T1D) non-obese diabetic (NOD) mice, the insulin B chain peptide 9-23 (B:9-23) can bind to the MHC class II molecule (IAg7) in register 3 (R3), creating a bimolecular IAg7/InsulinB:9-23 register 3 conformational epitope (InsB:R3). Previously, we showed that the InsB:R3-specific chimeric antigen receptor (CAR), constructed using an InsB:R3-monoclonal antibody, could guide CAR-expressing CD8 T cells to migrate to the islets and pancreatic lymph nodes. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
12 Samples
Download data: XLS
Series
Accession:
GSE238146
ID:
200238146
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Supplemental Content

db=gds|term=|query=9|qty=2|blobid=MCID_67262fa18779bd4d7b29b4db|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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