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Items: 4

1.

FOXF1 defines the core-regulatory circuitry in gastrointestinal stromal tumor (GIST)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL16791
38 Samples
Download data: BIGWIG, NARROWPEAK
Series
Accession:
GSE106626
ID:
200106626

PubMed Full text in PMC Similar studies

2.

Expression profile of GIST48 cells with siETV1 or siFOXF1 knockdown

(Submitter supplied) To study FOXF1 transcriptome and compare that with ETV1 transcriptome, we knocked down ETV1 or FOXF1 with siRNA in GIST48 cells and studied the transcriptome changes
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
6 Samples
Download data: XLS
Series
Accession:
GSE106625
ID:
200106625

PubMed Full text in PMC Similar studies SRA Run Selector

3.

ETV1 and FOXF1 cistrome in wildtype GIST48, GIST-T1, MDA-PCa2b, and ETV1 or FOXF1 knocked-down GIST48 cells

(Submitter supplied) ChIP profiles were generated by deep sequencing using Illumina HiSeq.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16791
23 Samples
Download data: BIGWIG, NARROWPEAK
Series
Accession:
GSE106624
ID:
200106624

PubMed Full text in PMC Similar studies SRA Run Selector

4.

Chromatin accessibility of GIST48, GIST882 and GIST-T1 cells with ETV1 or FOXF1 knockdown

(Submitter supplied) ATAC profiles were generated by deep sequencing using Illumina HiSeq.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16791
9 Samples
Download data: BIGWIG
Series
Accession:
GSE106623
ID:
200106623

PubMed Full text in PMC Similar studies SRA Run Selector

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