GEO DataSet Links for SRA (Select 10661711) - GEO DataSets

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Items: 2

Select item 3044985741.

Faecalicatena contorta 588 Galactose 2

Organism:: Faecalicatena contorta

Source name:: Bacterial Total RNA

Platform:: GPL28454
Series:: GSE149357

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Sample

Accession:: GSM4498574

ID:: 304498574

SRA Run Selector

Select item 2001493572.

RNA-seq of human gut bacterial isolates grown on seaweed polysaccharides

(Submitter supplied) Purpose: Examining the transcriptome of human gut bacteria that grow on seaweed polysaccharides as a sole carbon source Methods: Strains were grown on 5 mg/ml seaweed polysaccharides (carrageenan, agarose and/or poprhyran respective to strain) or galactose as a sole carbon source in vitro. Fold change was calculated as seaweed polysaccharide over galactose with n=2 biological replicates. Once cells reached an optical density corresponding to mid-log phase growth, RNA was isolated and rRNA depleted. more...