GEO DataSet Links for SRA (Select 16561511) - GEO DataSets

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Items: 2

Select item 3055978301.

rne(5p) replicate 1

Organism:: Synechocystis sp. PCC 6803

Source name:: cells from liquid culture

Platform:: GPL22923
Series:: GSE184824

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Sample

Accession:: GSM5597830

ID:: 305597830

SRA Run Selector

Select item 2001848242.

Comparison of wild-type Synechocystis sp. PCC 6803 with strains overexpressing wild-type or 5’-sensing-deficient RNase E

(Submitter supplied) We compared transcriptomic changes, 5'-triphosphorylated (TSS) and 5'-monophosphorylated (PSS) RNA ends of different strains of the cyanobacterium Synechocystis sp. PCC6803. Comparison encompassed wild-type Synechocystis (WT), a strain overexpressing RNase E and RNase HII (rne(WT)) and a strain overexpressing 5’-sensing-deficient RNase E and RNase HII (rne(5p)). Analysis of changing 5'-monophosphorylated ends revealed 5’ sensing depedent processing sites on a transcriptome-wide level.