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Items: 14

1.

The sulfur stress response caused by sodium hydrosulfide, allicin and diallyl polysulfanes in Bacillus subtilis as revealed by transcriptomics

(Submitter supplied) In this study, we compared the transcriptome signatures in response to sodium hydrosulfide (NaHS), allicin and diallyl tetrasulfane (DAS4) exposure in the Gram-positive bacterium Bacillus subtilis. This analysis revealed that NaHS, allicin and DAS4 caused a similar thiol-specific oxidative and electrophile stress response as well as protein and DNA damage.
Organism:
Bacillus subtilis subsp. subtilis str. 168; Bacillus subtilis
Type:
Expression profiling by array
Platform:
GPL21669
6 Samples
Download data: TXT
Series
Accession:
GSE132981
ID:
200132981

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Transcriptome changes in response to accumulation of cyclic di-AMP in Bacillus subtilis.

(Submitter supplied) Cyclic di-AMP is an essential second messenger in many Gram-positive bacteria, including the model organism Bacillus subtilis. Here, we analyzed the transcriptome of a strain accumulating c-di-AMP in vivo. Our results demonstrate that accumulation of c-di-AMP affects the expression of several hundred genes, among them many mother-cell specific sporulation genes. Additionally, the two major biofilm operons, epsA-O and tapA-sipW-tasA, are affected. more...
Organism:
Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168
Type:
Expression profiling by array
Platform:
GPL21669
6 Samples
Download data: TXT
Series
Accession:
GSE79716
ID:
200079716

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

B. subtilis_DAS4_rep2

Organism:
Bacillus subtilis
Source name:
B. subtilis_before DAS4 treatment (channel 1) B. subtilis_DAS4 treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897697
ID:
303897697

4.

B. subtilis_DAS4_rep1

Organism:
Bacillus subtilis
Source name:
B. subtilis_before DAS4 treatment (channel 1) B. subtilis_DAS4 treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897696
ID:
303897696

5.

B. subtilis_allicin_rep2

Organism:
Bacillus subtilis
Source name:
B. subtilis_before allicin treatment (channel 1) B. subtilis_allicin treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897695
ID:
303897695

6.

B. subtilis_allicin_rep1

Organism:
Bacillus subtilis
Source name:
B. subtilis_before allicin treatment (channel 1) B. subtilis_allicin treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897694
ID:
303897694

7.

B. subtilis_NaHS_rep2

Organism:
Bacillus subtilis
Source name:
B. subtilis_before NaHS treatment (channel 1) B. subtilis_NaHS treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897693
ID:
303897693

8.

B. subtilis_NaHS_rep1

Organism:
Bacillus subtilis
Source name:
B. subtilis_before NaHS treatment (channel 1) B. subtilis_NaHS treated (channel 2)
Platform:
GPL21669
Series:
GSE132981
Download data: TXT
Sample
Accession:
GSM3897692
ID:
303897692

9.

B. subtilis gdpP pgpH mutant_exponential growth_rep3

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis gdpP pgpH mutant_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101531
ID:
302101531

10.

B. subtilis gdpP pgpH mutant_exponential growth_rep2

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis gdpP pgpH mutant_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101530
ID:
302101530

11.

B. subtilis gdpP pgpH mutant_exponential growth_rep1

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis gdpP pgpH mutant_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101529
ID:
302101529

12.

B. subtilis wild type_exponential growth_rep3

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis wild type_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101528
ID:
302101528

13.

B. subtilis wild type_exponential growth_rep2

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis wild type_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101527
ID:
302101527

14.

B. subtilis wild type_exponential growth_rep1

Organism:
Bacillus subtilis
Source name:
pooled RNA (equal amounts of RNA from all samples) (channel 1) B. subtilis wild type_exponential growth (channel 2)
Platform:
GPL21669
Series:
GSE79716
Download data: TXT
Sample
Accession:
GSM2101526
ID:
302101526

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