GEO DataSets

(Submitter supplied) Spores of Bacillales and Clostridiales species contain 100s of different mRNAs, and their major function in Bacillus subtilis is to provide ribonucleotides for new RNA synthesis when spores germinate. In new work, RNA was isolated from spores of five Bacillales and one Clostridioides species and relative spore mRNA levels were determined by RNA-seq. Determination of RNA levels in single spores allowed calculation of RNA nt/spore, and assuming mRNA is 3% of spore RNA allowed calculation that only ~6% of spore mRNAs were present at ≥ 1/spore. more...

Organism:

Clostridioides difficile 630; Priestia megaterium QM B1551; Bacillus subtilis; Bacillus thuringiensis str. Al Hakam; Bacillus atrophaeus ATCC 9372; Geobacillus stearothermophilus ATCC 12980

Type:

Expression profiling by high throughput sequencing

6 related Platforms

12 Samples

Download data: TXT

(Submitter supplied) Plant growth promoting rhizobacteria (PGPR) of the genus Bacillus are successfully used as biofertilizers and biopesticides. They potentially can reduce the use of chemicals in agriculture as an ecologically safe alternative, but to optimize the application of PGPR, more profound knowledge on specific gene regulation and molecular mechanisms of interaction with plants is needed. Advance in sequencing technologies made it affordable to compare transcriptom profiles of relative organisms to check to which extend PGPR strains or closely related species differ in their strategies of plant colonization. more...

Organism:

Bacillus atrophaeus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL20146

5 Samples

Download data: TXT