GEO DataSets

(Submitter supplied) Cronobacter sakazakii is well-known for its desiccation tolerance in the powdered infant formula (PIF) food production environment and the bacterium has been linked with high fatality rates in neonates who consume contaminated product. In this study, using deep-level RNA-sequencing, differentially expressed genes were studied in C. sakazakii ATCCTM29544 grown in simulated low-moisture environment designed to mimic the PIF production environment. more...

Organism:

Cronobacter sakazakii

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26479

14 Samples

Download data: TXT

(Submitter supplied) Cronobacter sakazakii is a foodborne opportunistic pathogen that causes pneumonia, meningitis and bacteremia. To understand the acidic regulated and two component system PmrA/PmrB about strain pathogenesis, transcriptomics  analysis of C. sakazakii grown under acidic pH 5.0 was performed by using RNA-sequencing.

Organism:

Cronobacter sakazakii

Type:

Expression profiling by high throughput sequencing

Platform:

GPL28273

5 Samples

Download data: TXT

(Submitter supplied) Cronobacter sakazakii is a xerotolerant neonatal pathogen epidemiologically linked to powdered infant food formula, often leading to high mortality rates. Here, we used RNA-seq to provide physiological and transcriptional insights into the survival of C. sakazakii in desiccated conditions. Our RNA-seq data shows that about 22% of the total C. sakazakii genes were significantly up-regulated and 9% were down-regulated during desiccation survival. more...

Organism:

Cronobacter sakazakii

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25429

6 Samples

Download data: TXT

(Submitter supplied) The genus Cronobacter (formerly called Enterobacter sakazakii) is composed of five species; C. sakazakii, C. malonaticus, C. turicensis, C. muytjensii, and C. dublinensis. The genus includes opportunistic human pathogens, and the first three species have been associated with neonatal infections. The most severe diseases are caused in neonates and include fatal necrotizing enterocolitis and meningitis. more...

Organism:

Cronobacter sakazakii ATCC BAA-894; Cronobacter dublinensis; Cronobacter muytjensii; Cronobacter sakazakii; Cronobacter turicensis; Cronobacter malonaticus

Type:

Genome variation profiling by genome tiling array

Platform:

GPL9745

10 Samples

Download data: PAIR

(Submitter supplied) see Nimblegen site

Organism:

Cronobacter sakazakii ATCC BAA-894

1 Series

10 Samples

Download data: NDF, POS