GEO DataSets

(Submitter supplied) Using RNAseq of small RNA libraries isolated from the gill tissue of the Antarctic fish Trematomus bernacchii we have characterized the termal sensitivity of miRNA homologues in these highly stenothermic fish.

Organism:

Trematomus bernacchii

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL26283

24 Samples

Download data: XLSX

(Submitter supplied) The Antarctic icefish, a family (Channichthyidae) of teleosts within the perciform suborder Notothenioidei, are the only known vertebrates without oxygen-transporting hemoglobins and that are largely devoid of circulating erythrocytes. To elucidate the evo-devo mechanisms underpinning the suppressed erythropoiesis in the icefish, we conducted comparative studies on the transcriptomes and microRNAomes of the primary hematopoietic tissues between an icefish (Chionodraco hamatus) and two red-blooded notothenioids (Trematomus bernacchii and Gymnodraco acuticeps). more...

Organism:

Chionodraco hamatus; Gymnodraco acuticeps; Trematomus bernacchii

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL20597 GPL20599 GPL20598

9 Samples

Download data: TXT

(Submitter supplied) The goal of this study was to measure the effect of heat stress on the transcriptome of a cold-adapted fish (Trematomus bernacchii) and compare it to a temperate species (Gillichthys mirabilis). This SuperSeries is composed of the SubSeries listed below.

Organism:

Trematomus bernacchii; Gillichthys mirabilis

Type:

Expression profiling by array

Platform:

GPL5573

18 Samples

Download data: GPR

(Submitter supplied) The goal of this study was to measure the effect of heat stress on the transcriptome of a cold-adapted fish species - Trematomus bernacchii - an Antarctic fish species. Keywords: Stress response

Organism:

Trematomus bernacchii; Gillichthys mirabilis

Type:

Expression profiling by array

Platform:

GPL5573

12 Samples

Download data: GPR