GEO DataSets

(Submitter supplied) Examined expression of microRNAs in different life-cycle stages and gut tissue of the pathogenic nematode Haemonchus contortus and identified differentially expressed miRNAs. Custom array contained probes to 609 Haemonchus contortus miRNA sequence (all mature and start miRNAs identified by Winter et al., 2012, BMC Genomics13:4; DOI: 10.1186/1471-2164-13-4) and all C. elegans sequences in miRBase release 16

Organism:

Caenorhabditis elegans; Haemonchus contortus

Type:

Non-coding RNA profiling by array

Platform:

GPL23788

17 Samples

Download data: TXT

(Submitter supplied) Anthelmintic resistance is a major problem in the global fight against parasitic nematodes., Most previous studies have focused on the analysis of potential candidate genes that may have a role in resistance. Here we take a novel approach in the important parasite, Haemonchus contortus, by investigating changes in microRNA expression between resistant and susceptible parasites. The resistant worms included two geographically distinct strains and two lines generated by multiple rounds of backcrossing between susceptible and resistant parents, with ivermectin selection. more...

Organism:

Haemonchus contortus

Type:

Non-coding RNA profiling by array

Platform:

GPL21648

27 Samples

Download data: XLS

(Submitter supplied) Illumina sequencing of small RNAs from Brugia pahangi and Haemonchus contortus

Organism:

Brugia pahangi; Haemonchus contortus

Type:

Non-coding RNA profiling by high throughput sequencing

Platforms:

GPL15031 GPL15032

4 Samples

Download data: TXT

(Submitter supplied) custom miRNA microarray with 100% coverage of mature c. elegans miRNAs listed in miRBase version 16 plus additional custom sequences provided by the customer. Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://miRBase.org) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. more...

Organism:

Caenorhabditis elegans; Haemonchus contortus

1 Series

17 Samples

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(Submitter supplied) Performed by LC Sciences http://www.lcsciences.com/discovery/applications/transcriptomics/mirna-profiling/mirna/

Organism:

Haemonchus contortus

1 Series

27 Samples

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