GEO DataSets

(Submitter supplied) Aedes albopictus shows a rapid global expansion and dramatic vectorial capacity for various arboviruses, thus posing a severe threat to global health. Although many noncoding RNAs have been confirmed to play functional roles in various biological processes in Ae. albopictus, the roles of circRNA remain a mystery. In the present study, we first performed high-throughput circRNA sequencing in Ae. albopictus. more...

Organism:

Aedes albopictus

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL33013

6 Samples

Download data: TXT

(Submitter supplied) To compare different differential expression profile between malathion resistant and susceptible Ae. albopictus in Harris County and to identify candidate genes involved in matabolic detoxification of malathion

Organism:

Aedes albopictus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32821

20 Samples

Download data: TXT

(Submitter supplied) Most alphaviruses are transmitted by mosquito vectors and infect a wide range of vertebrate hosts, with a few exceptions. Eilat virus (EILV) in this genus is characterized by a host range restricted to mosquitoes. Its chimeric viruses have been developed as safe and effective vaccine candidates and diagnostic tools. Here, we investigated the interactions between these insect-specific viruses (ISVs) and mosquito cells, unveiling their potential roles in determining vector competence and arbovirus transmission. more...

Organism:

Aedes albopictus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32821

12 Samples

Download data: TXT

(Submitter supplied) We present an integrated resource of profiling and analysis of small RNAs from mosquiot cells and tissues from 4 main species to determine how the viruses and transposons compare in the production of small regulatory RNAs.

Organism:

Aedes aegypti; Anopheles gambiae; Culex quinquefasciatus; Aedes albopictus

Type:

Non-coding RNA profiling by high throughput sequencing

4 related Platforms

54 Samples

Download data: TXT

(Submitter supplied) The dengue virus (DENV) cause frequent epidemics infecting ~390 million people annually in over 100 countries. There are no approved vaccines or antiviral drugs for treatment of infected patients. However, there is a novel approach to control transmission of DENV by the mosquito vectors, Aedes aegypti and Ae. albopictus, using Wolbachia symbiont. The wMelPop strain of Wolbachia suppresses DENV transmission and shortens the mosquito life span. more...

Organism:

Aedes albopictus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26091

11 Samples

Download data: TXT

(Submitter supplied) DNA methylation is an important chromatin modification that is necessary for the structural integrity and proper regulation of the genome for many species. Despite its conservation across the tree of life, little is known about its contribution to complex traits. Reports that differences in DNA methylation between castes in closely related Hymenopteran insects (ants, bees and wasps) contributes to social behaviors has generated hypotheses on the role of DNA methylation in governing social behavior. more...

Organism:

Acyrthosiphon pisum; Anastrepha suspensa; Aphidius ervi; Toxorhynchites amboinensis; Pemphigus populicaulis; Pyractomena borealis; Aedes aegypti; Anopheles gambiae; Culex quinquefasciatus; Reticulitermes virginicus; Pemphigus obesinymphae; Blaptica dubia; Pemphigus populitransversus; Microplitis mediator; Chrysodeixis includens; Heliothis virescens; Copidosoma floridanum; Eublaberus posticus; Reticulitermes flavipes; Microplitis demolitor; Polistes carolina; Blattella asahinai; Blattella germanica; Periplaneta americana; Helicoverpa zea; Aedes albopictus; Aedes atropalpus; Rhyparobia maderae; Cryptocercus garciai; Aphis craccivora

Type:

Methylation profiling by high throughput sequencing

30 related Platforms

69 Samples

Download data: TXT

(Submitter supplied) Viruses transmitted by small mammals and arthropods serve as global threats to humans. Most emergent and re-emergent viral agents are transmitted by these groups; therefore, the development of high-throughput screening methods for the detection and surveillance of such viruses is of great interest. In this study, we describe a DNA microarray platform that can be used for screening all viruses transmitted by small mammals and arthropods (SMAvirusChip) with nucleotide sequences that have been deposited in the GenBank. more...

Organism:

Homo sapiens; Viruses; dengue virus type 4; West Nile virus; Dengue virus; Mayaro virus; Chlorocebus sabaeus; Zika virus; Oropouche virus; dengue virus type 1; dengue virus type 3; St. Louis encephalitis virus; Yellow fever virus; Guaroa virus; Aedes albopictus; Togaviridae; Flavivirus; dengue virus type 2; Rhabdoviridae; Piry virus; Ilheus virus; Bussuquara virus; Rocio virus; Aedes aegypti; Flaviviridae; Chikungunya virus; Rio Mamore hantavirus; Mucambo virus; Cacipacore virus; Iguape virus

Type:

Expression profiling by array

Platforms:

GPL21870 GPL21871

87 Samples

Download data: GPR

(Submitter supplied) Viruses transmitted by small mammals and arthropods serve as global threats to humans. Most emergent and re-emergent viral agents are transmitted by these groups; therefore, the development of high-throughput screening methods for the detection and surveillance of such viruses is of great interest. In this study, we describe a DNA microarray platform that can be used for screening all viruses transmitted by small mammals and arthropods (SMAvirusChip) with nucleotide sequences that have been deposited in the GenBank. more...

Organism:

Aedes albopictus; Chikungunya virus; dengue virus type 1; dengue virus type 3; dengue virus type 2; Viruses; dengue virus type 4; Zika virus

Type:

Expression profiling by array

Platform:

GPL21871

7 Samples

Download data: GPR

(Submitter supplied) Viruses transmitted by small mammals and arthropods serve as global threats to humans. Most emergent and re-emergent viral agents are transmitted by these groups; therefore, the development of high-throughput screening methods for the detection and surveillance of such viruses is of great interest. In this study, we describe a DNA microarray platform that can be used for screening all viruses transmitted by small mammals and arthropods (SMAvirusChip) with nucleotide sequences that have been deposited in the GenBank. more...

Organism:

Viruses; Togaviridae; dengue virus type 1; St. Louis encephalitis virus; West Nile virus; Dengue virus; Mayaro virus; Flaviviridae; dengue virus type 3; Mucambo virus; Guaroa virus; Oropouche virus; Aedes aegypti; Homo sapiens; Flavivirus; dengue virus type 4; Rhabdoviridae; Ilheus virus; Chlorocebus sabaeus; Bussuquara virus; Rocio virus; Aedes albopictus; dengue virus type 2; Yellow fever virus; Piry virus; Chikungunya virus; Rio Mamore hantavirus; Cacipacore virus; Iguape virus

Type:

Expression profiling by array

Platform:

GPL21870

80 Samples

Download data: GPR

(Submitter supplied) The impact of global climate change on the transmission dynamics of infectious diseases is the subject of extensive debate. The transmission of mosquito-borne viral diseases is particularly complex, with climatic variables directly affecting many parameters associated with the prevalence of disease vectors. While evidence shows that warmer temperatures often decrease the extrinsic incubation period of an arthropod-borne virus (arbovirus), exposure to cooler temperatures often predisposes disease vector mosquitoes to higher infection rates. more...

Organism:

Aedes aegypti; Aedes albopictus

Type:

Non-coding RNA profiling by high throughput sequencing

Platforms:

GPL14869 GPL17038

8 Samples

Download data: XLSX

(Submitter supplied) The natural maintenance cycles of many mosquito-borne pathogens require establishment of persistent non-lethal infections in the invertebrate host. The mechanism by which this occurs is not well understood, but we have previously shown that an antiviral response directed by small interfering RNAs (siRNAs) is important in modulating the pathogenesis of alphavirus infections in the mosquito. However, we report here that infection of mosquitoes with an alphavirus also triggers the production of another class of virus-derived small RNAs that exhibit many similarities to ping-pong-dependent piwi-interacting RNAs (piRNAs). more...

Organism:

Aedes albopictus; Aedes aegypti

Type:

Non-coding RNA profiling by high throughput sequencing

Platforms:

GPL14594 GPL14595

20 Samples

Download data: PDF, TXT, XLS