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15 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL20705
GSE269229	A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [Hi-C]	Other	Neurospora crassa	8		H5	Andrew David Klocko	Jun 10, 2024
GSE269235	A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Neurospora crassa	23		BEDGRAPH BIGWIG H5 TXT	Andrew David Klocko	Jun 10, 2024
GSE100770	Saturating the Neurospora crassa genome for defective in methylation (dim) mutants	Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	3		TDF SRA Run Selector	Andrew David Klocko	Sep 21, 2020
GSE121333	Context dependent Histone H3 Lysine 4 methylation is necessary for repression and is a requisite modification for facultative heterochromatin at distinct loci [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	20		BED SRA Run Selector	William J. Belden	Nov 30, 2018
GSE121353	Context dependent Histone H3 Lysine 4 methylation is necessary for repression and is a requisite modification for facultative heterochromatin at distinct loci [RNA-seq]	Expression profiling by high throughput sequencing	Neurospora crassa	12		FPKM_TRACKING GTF SRA Run Selector	William J. Belden	Nov 30, 2018
GSE121356	Context dependent Histone H3 Lysine 4 methylation is necessary for repression and is a requisite modification for facultative heterochromatin at distinct loci	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	32			William J. Belden	Nov 30, 2018
GSE118495	ASH-1-catalyzed H3K36 methylation drives gene repression and marks H3K27me2/3-competent chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	18		BED BIGWIG CSV TDF TXT SRA Run Selector	Vincent T Bicocca	Aug 14, 2018
GSE113845	RNA-sequencing of WT and ΔMSN1 strains of N. crassa over a circadian time course	Expression profiling by high throughput sequencing	Neurospora crassa	24		CSV SRA Run Selector	Michael Brunner	Aug 01, 2018
GSE99245	The coding and noncoding transcriptome of Neurospora crassa	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Neurospora crassa	8		BIGWIG TXT SRA Run Selector	Michael Brunner	Jan 23, 2018
GSE104019	Telomere repeats induce domains of H3K27 methylation in Neurospora	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Neurospora crassa	34		BEDPE TDF TSV TXT SRA Run Selector	Eric Selker	Dec 29, 2017
GSE101412	Gene expression during conidia germination in Neurospora crassa on different media	Expression profiling by high throughput sequencing	Neurospora crassa	24		TXT SRA Run Selector	Francesc Lopez	Sep 15, 2017
GSE92848	A Fungal Transcription Factor Essential for Starch Degradation Regulates Primary Carbon and Nitrogen Metabolism and Amino Acid Biosynthesis	Expression profiling by high throughput sequencing	Neurospora crassa	21		TXT SRA Run Selector	Yi Xiong	Apr 09, 2017
GSE82222	Neurospora crassa genome organization requires subtelomeric facultative heterochromatin	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Neurospora crassa	16		BCF FASTA GTF TDF TXT XLSX SRA Run Selector	Andrew David Klocko	Oct 27, 2016
GSE71024	HiC of Wild Type Neurospora crassa and mutants deficient in heterochromatin formation	Genome binding/occupancy profiling by high throughput sequencing Other	Neurospora crassa	5		FASTA GTF TDF TXT SRA Run Selector	Andrew David Klocko	May 19, 2016
GSE78157	Genomic analysis of N. crassa histone H1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	22		TDF TXT SRA Run Selector	Zachary A Lewis	Apr 20, 2016