GEO Browser - GEO

Series

Samples

Platforms

DataSets

26 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Plasmodium falciparum		BED
GSE190497	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq I)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	11	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE190519	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	59	BED BW TAR	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE230206	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq II)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	32	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE197916	Metabolic competition between lipid metabolism and histone methylation regulates sexual differentiation in human malaria parasites	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	30	BED BEDGRAPH	Bjorn FC Kafsack	Jul 01, 2023
GSE210010	Replication origin mapping in the malaria parasite P. falciparum	Other	Plasmodium falciparum	8	BED	Michael Boemo	Aug 04, 2022
GSE184658	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	144	BED BW SRA Run Selector	Mei Jiang	Mar 06, 2022
GSE184659	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	192	BED BW	Mei Jiang	Mar 06, 2022
GSE180437	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	3	BED BW SRA Run Selector	Mei Jiang	Feb 02, 2022
GSE180438	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	15	BED BW	Mei Jiang	Feb 02, 2022
GSE149773	A transcriptional repressor programs gametocytogenesis in human malaria parasites (PfAP2-G5) [ChIP-Seq TF]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	18	BED BW SRA Run Selector	Shijun Shen	Aug 03, 2021
GSE166390	Expression patterns of Plasmodium falciparum clonally variant genes at the onset of a blood infection in non-immune humans [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	4	BED NARROWPEAK SRA Run Selector	Anastasia Pickford	Jul 01, 2021
GSE141759	HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [HiC]	Other	Plasmodium falciparum	8	BED MATRIX SRA Run Selector	meng liu	Apr 14, 2021
GSE141760	HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [HM-ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	12	BED SRA Run Selector	meng liu	Apr 14, 2021
GSE141761	HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [TF ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	6	BED BW SRA Run Selector	meng liu	Apr 14, 2021
GSE108716	Genome-wide mapping of RNAPII and its phosphoisoforms in Plasmodium falciparum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	30	BED BEDGRAPH BW NARROWPEAK TXT XLS SRA Run Selector	Mark Stephen Featherstone	Dec 30, 2020
GSE135002	Conditional expression of PfAP2-G for controlled massive sexual conversion in Plasmodium falciparum. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	8	BED BEDGRAPH FASTA SRA Run Selector	Oriol Llorà-Batlle	Jun 10, 2020
GSE134268	PfAP2-G ChIP-seq in stage I gametocytes derived via next cycle conversion (NCC) and same cycle conversion (SCC)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	8	BED BIGWIG SRA Run Selector	Manuel Llinas	Jul 17, 2019
GSE120448	PfAP2-G ChIP-seq in committed schizonts, sexual rings, and stage I gametocytes	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	12	BED BIGWIG SRA Run Selector	Manuel Llinas	Feb 11, 2019
GSE120488	PfAP2-G and PfAP2-I ChIP-seq in schizonts	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	6	BED BIGWIG SRA Run Selector	Manuel Llinas	Feb 11, 2019
GSE125566	Regulation of sexual differentiation is linked to invasion in malaria parasites	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	62	BED BIGWIG TXT	Manuel Llinas	Feb 08, 2019