GEO Browser - GEO

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30 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus		BW
GSE254180	Centromeric chromatin in mitosis reorganizes into a functional structure stabilized by cohesin [Halo-ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	32	BW	Shaun Michael Webb	Apr 01, 2024
GSE254181	Centromeric chromatin in mitosis reorganizes into a functional structure stabilized by cohesin [CENPA-ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	8	BW	Shaun Michael Webb	Apr 01, 2024
GSE254182	Centromeric chromatin in mitosis reorganizes into a functional structure stabilized by cohesin	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	100	BEDGRAPH BW	Shaun Michael Webb	Apr 01, 2024
GSE261486	Chromatin remodeller Chd7 is developmentally regulated in the neural crest by tissue - specific transcription factors	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	6	BED BW	Tatjana Sauka-Spengler	Mar 19, 2024
GSE228335	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [NCC CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	10	BW	Marcos Simoes-Costa	Nov 22, 2023
GSE228340	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [NCC ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	2	BW	Marcos Simoes-Costa	Nov 22, 2023
GSE228341	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [SOX9 MO ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	4	BW	Marcos Simoes-Costa	Nov 22, 2023
GSE228342	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [R-GNE-140 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	4	BW	Marcos Simoes-Costa	Nov 22, 2023
GSE228343	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	25	BEDGRAPH BW TXT	Marcos Simoes-Costa	Nov 22, 2023
GSE241256	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [CUT&RUN control and SOX9/TEA1-VPR over-expressing]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	4	BEDGRAPH BW	Marcos Simoes-Costa	Nov 22, 2023
GSE200405	Exploration of the genome-wide DNA binding of chicken p53 in LMH cells	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	8	BW	Hai Li	Oct 05, 2022
GSE185774	Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Monodelphis domestica Mus musculus	5	BW SRA Run Selector	Michael I Robson	Sep 29, 2022
GSE185775	Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Gallus gallus Monodelphis domestica Mus musculus	88	BW HIC	Michael I Robson	Sep 29, 2022
GSE102825	Epigenetic and transcriptomic signature reveals Sox8 as an otic master regulator	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	5	BW SRA Run Selector	Andrea Streit	Aug 01, 2022
GSE195592	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds	Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Mus musculus	46	BED BEDGRAPH BIGWIG BW COOL NARROWPEAK TXT	Aurelie Hintermann	Jun 20, 2022
GSE180177	Immunoglobulin enhancers increase RNA polymerase 2 stalling at somatic hypermutation target sequences [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Homo sapiens	22	BW SRA Run Selector	Yaakov Maman	Oct 22, 2021
GSE180178	Immunoglobulin enhancers increase RNA polymerase 2 stalling at somatic hypermutation target sequences	Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Homo sapiens	24	BW	Yaakov Maman	Oct 22, 2021
GSE164736	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	12	BW SRA Run Selector	Shalu Jhanwar	Jul 31, 2021
GSE164738	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus Mus musculus	30	BW	Shalu Jhanwar	Jul 31, 2021
GSE151697	Cis-regulatory dissection of cone development reveals a broad role for Otx2 and Oc transcription factors [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	8	BW NARROWPEAK SRA Run Selector	CHANGHEE LEE	Apr 19, 2021