GEO Browser - GEO

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84 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Arabidopsis thaliana		NARROWPEAK
GSE268510	Evolutionary Conservation and Functional Role of the SWI/SNF Complex Protein BDH in Arabidopsis: Insights into Catalytic Subcomplex Stability and Biological Implications [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	3	BW NARROWPEAK	Jaime Pérez	Oct 10, 2024
GSE243365	mRNA ADENOSINE METHYLASE promotes drought tolerance through N6-methyladenosine-dependent and independent impacts on mRNA regulation in Arabidopsis	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	48	BIGWIG COUNTS NARROWPEAK	Diep R Ganguly	Oct 07, 2024
GSE183557	Genome-wide histone 3 lysine 27 trimethylation patterns in wild type and CLF-deficient Arabidopsis plants after high humidity treatment [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	16	BW NARROWPEAK SRA Run Selector	Minhang Yuan	Sep 06, 2024
GSE183559	Genome-wide histone 3 lysine 27 trimethylation patterns and expression analysis of WT and CLF-deficient Arabidopsis plants after high humidity treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	32	BW NARROWPEAK	Minhang Yuan	Sep 06, 2024
GSE250168	The SBP transcription factor SPL10 regulates leaf curvature by promoting REVOLUTA transcription in plants	Other	Arabidopsis thaliana	3	NARROWPEAK TXT	Xu Pengfei	Jun 20, 2024
GSE228358	PLETHORA transcription factors promote early embryo development through induction of meristematic potential	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	NARROWPEAK	Merijn Kerstens	Jun 14, 2024
GSE243804	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Brassica napus Citrus sinensis Dianthus caryophyllus Glycine max Oryza sativa Populus Saccharum officinarum Solanum lycopersicum Solanum tuberosum Zea mays	154	BROADPEAK NARROWPEAK	Wenying Zhong	Apr 28, 2024
GSE243806	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana Brassica napus Citrus sinensis Dianthus caryophyllus Glycine max Oryza sativa Populus Saccharum officinarum Solanum lycopersicum Solanum tuberosum Zea mays	162	BROADPEAK NARROWPEAK	Wenying Zhong	Apr 28, 2024
GSE246997	AtSDR4L and DIG1 interact with VAL2 to promote seed-to-seedling transition	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	18	BROADPEAK NARROWPEAK TDF	Liang Song	Apr 23, 2024
GSE253236	Phytochrome C and Low Temperature Promote the Expression and Red Light Signaling of Phytochrome D	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	9	BW NARROWPEAK	Gabor Grezal	Jan 19, 2024
GSE236290	MBD2 couples DNA methylation to Transposable Elements silencing during male gametogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	146	BED BW MTX NARROWPEAK TSV TXT WIG	Shuya Wang	Jan 12, 2024
GSE222657	CONSTANS alters the circadian clock in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	8	BW NARROWPEAK	Pedro de los Reyes	Jan 01, 2024
GSE217611	The UBP5 histone H2A deubiquitinase counteracts PRCs-mediated repression to regulate Arabidopsis development	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	3	BW NARROWPEAK	Sara Farrona	Dec 06, 2023
GSE217614	The UBP5 histone H2A deubiquitinase counteracts PRCs-mediated repression to regulate Arabidopsis development	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	19	BROADPEAK BW NARROWPEAK	Sara Farrona	Dec 06, 2023
GSE225480	H1 restricts euchromatin-associated methylation pathways from heterochromatic encroachment	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	34	BW NARROWPEAK	Zhenhui Zhong	Sep 12, 2023
GSE171536	Pathogen induced m6A dynamics regulate plant immunity	Other Expression profiling by high throughput sequencing	Arabidopsis thaliana	75	NARROWPEAK TXT SRA Run Selector	Brian D Gregory	Sep 08, 2023
GSE157152	Characterization of distinct types of open chromatin and their impacts on gene transcription in maize	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Zea mays	6	BED BW NARROWPEAK	Wenli Zhang	Aug 27, 2023
GSE220945	Co-condensation with photoexcited Cryptochromes facilitates MOS4-associated complex subunits 3A/3B to antagonize HY5 activities during photomorphogenesis in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	BW NARROWPEAK	Bochen Jiang	Aug 21, 2023
GSE218481	ChIP-seq analysis of E2FA, E2FB, E2FC and RBR targets	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	7	BIGWIG BROADPEAK NARROWPEAK	Xiaoning HE	Aug 06, 2023
GSE220898	The PFYRE Subdomain in Master Growth Repressor DELLA is Essential for Its Association with Target Chromatin via Histone H2A Binding	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	BED NARROWPEAK	Hao Tian	Jun 27, 2023