GEO Browser - GEO

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116 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Arabidopsis thaliana		TXT
GSE21781	Mapping origins of replication in Arabidopsis thaliana: Examination of BrdU labeled DNA and unlabeled DNA in one cell type	Other	Arabidopsis thaliana	4	BED TXT SRA Run Selector	Hume Stroud	Nov 06, 2011
GSE21828	Mapping origins of replication in Arabidopsis thaliana	Other Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	5	BAR BED CEL TXT	Hume Stroud	Feb 06, 2011
GSE26161	Profiling of Argonaute (AGO) 2-associated sRNAs after infection of bacterial pathogen Pseudomonas syringae	Other	Arabidopsis thaliana	4	TXT SRA Run Selector	Wei-Chi Wang	May 10, 2011
GSE27292	High-resolution analysis of parent-of-origin-allelic expression in Arabidopsis seeds	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	2	TXT SRA Run Selector	Marc Rehmsmeier	Apr 30, 2011
GSE27549	Genomic dna hybridizations of 10 Spring annual accessions of Arabidopsis thaliana	Other	Arabidopsis thaliana	30	CEL TXT	David Lee Des Marais	Mar 12, 2012
GSE27551	Genomic dna hybridizations of 8 winter annual accessions of Arabidopsis thaliana	Other	Arabidopsis thaliana	24	CEL TXT	David Lee Des Marais	Mar 12, 2012
GSE29386	Transcriptional and translational effect of the lack of translation initiation factor eIF(iso)4E	Expression profiling by array Other	Arabidopsis thaliana	6	TXT	TZVETANKA DIMITROVA DINKOVA	Jul 26, 2013
GSE32284	IBM1, a JmjC domain histone demethylase, is involved in the regulation of RNA-directed DNA methylation through epigenetic control of RDR2 and DCL3 expression in Arabidopsis.	Other Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Di Fan	Aug 03, 2012
GSE40216	Study of expression changes and alternative splicing events during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors pathogen-infection	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	18	TXT SRA Run Selector	Servane Baufume	Sep 02, 2017
GSE42695	Genome-wide profiling of long non-coding RNAs in Arabidopsis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT WIG SRA Run Selector	Yijun Qi	Nov 28, 2015
GSE50181	Characterization of chromosomal architecture in Arabidopsis thaliana by Chromosome Conformation Capture	Other	Arabidopsis thaliana	26	TXT XLSX SRA Run Selector	Stefan Grob	Nov 01, 2013
GSE51474	rpl24b/WT polysome loading and transcript levels (Arabidopsis thaliana)	Expression profiling by array Other	Arabidopsis thaliana	18	CEL TXT	Albrecht G von Arnim	Jan 01, 2014
GSE51480	PAB/WT polysome loading and transcript levels (Arabidopsis thaliana)	Expression profiling by array Other	Arabidopsis thaliana	22	CEL TXT	Albrecht G von Arnim	Jan 01, 2014
GSE55151	Differential expression of miRNAs and their target genes in senescing leaves and siliques: insights from massive sequencing of small RNAs and cleaved target RNAs	Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	14	TXT SRA Run Selector	Shawn R Thatcher	Sep 08, 2014
GSE55960	Chromosomal Architecture of Arabidopsis and its Implication in Transposon Intergration	Other	Arabidopsis thaliana	3	TXT SRA Run Selector	Stefan Grob	Aug 18, 2014
GSE58974	Global analysis of the RNA-protein interaction and RNA secondary structure landscapes of the Arabidopsis nucleus	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	10	BED TXT SRA Run Selector	Sager Jayesh Gosai	Dec 16, 2014
GSE60929	Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs in Arabidopsis	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	9	TXT SRA Run Selector	Peng Du	Aug 30, 2014
GSE61439	Pol-IV dependent transcripts in Arabidopsis	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	42	PDF TXT WIG XLSX SRA Run Selector	Steve Jacobsen	Sep 13, 2015
GSE63879	tRNA-derived small RNAs target transposable element transcripts	Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	11	TXT SRA Run Selector	German Martinez	Feb 23, 2017
GSE64389	RNA-directed DNA Methylation is associated with gene expression via chromosomal Interactions	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	12	TXT SRA Run Selector	M Jordan Rowley	Jun 01, 2016