GEO Browser - GEO

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61 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Enterococcus faecalis
GSE261583	The HtrA chaperone monitors sortase-assembled pilus biogenesis in E. faecalis	Expression profiling by high throughput sequencing	Enterococcus faecalis	33	XLSX	Kimberly Kline	May 31, 2024
GSE268264	Arginine impacts aggregation, biofilm formation, and antibiotic susceptibility in Enterococcus faecalis	Expression profiling by high throughput sequencing	Enterococcus faecalis	8	TXT	Julia Willett	May 28, 2024
GSE234500	YvcL-regulated genes in Enterococcus faecalis	Expression profiling by high throughput sequencing	Enterococcus faecalis	8	TXT	CHRIS KRISTICH	Mar 08, 2024
GSE206749	Purine and carbohydrate availability drive Enterococcus faecalis fitness in wound infections [dataset 1]	Expression profiling by high throughput sequencing	Enterococcus faecalis	8	TXT	Casandra Tan	Nov 06, 2023
GSE206750	Purine and carbohydrate availability drive Enterococcus faecalis fitness in wound infections [dataset 2]	Expression profiling by high throughput sequencing	Enterococcus faecalis	12	TXT	Casandra Tan	Nov 06, 2023
GSE206751	Purine and carbohydrate availability drive Enterococcus faecalis fitness in wound infections.	Expression profiling by high throughput sequencing	Enterococcus faecalis	20		Casandra Tan	Nov 06, 2023
GSE233193	Comparison of methods to generate a pooled Enterococcus faecalis Tn library from arrayed library plates	Other	Enterococcus faecalis	3	TXT	Julia Willett	May 22, 2023
GSE180397	Gene expression profiles of differentially expressed genes in Enterococcus faecalis 14 ΔpnpA mutant strain	Expression profiling by array	Enterococcus faecalis	12	GPR XLSX	Anca Lucau-Danila	Apr 20, 2023
GSE153497	RNA degradation analysis reveals ribosome dynamics in complex microbiome samples	Other	Alistipes finegoldii Bacillus amyloliquefaciens Bacillus subtilis Caulobacter vibrioides Cryptococcus neoformans Enterococcus faecalis Escherichia coli Hoylesella timonensis Lactiplantibacillus plantarum Limosilactobacillus fermentum Limosilactobacillus reuteri Listeria monocytogenes Parabacteroides merdae Saccharomyces cerevisiae Salmonella enterica Segatella copri Staphylococcus aureus Synechocystis sp. PCC 6803 compost metagenome human feces metagenome	199	BEDGRAPH TXT XLSX SRA Run Selector	Vicent Pelechano	Mar 24, 2023
GSE180237	Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states	Expression profiling by high throughput sequencing	Enterococcus faecalis Escherichia coli Klebsiella pneumoniae Pseudomonas aeruginosa	35	TSV TXT SRA Run Selector	Peijun Ma	Jan 27, 2023
GSE165751	Enterococci enhance Clostridioides difficile pathogenesis	Expression profiling by high throughput sequencing	Clostridioides difficile Enterococcus faecalis	9	BW TSV SRA Run Selector	Joseph Zackular	Sep 17, 2022
GSE193042	CroR-regulated genes in Enterococcus faecalis OG1	Expression profiling by high throughput sequencing	Enterococcus faecalis	16	TXT	CHRIS KRISTICH	Jul 25, 2022
GSE190090	Enterococcus faecalis antagonizes Pseudomonas aeruginosa growth in mixed-species interactions	Expression profiling by high throughput sequencing	Enterococcus faecalis Pseudomonas aeruginosa	30	TXT SRA Run Selector	Casandra Tan	Jun 15, 2022
GSE192438	Gene expression in response to deoxycholate acid constraints growth of Enterococcus faecalis	Expression profiling by high throughput sequencing	Enterococcus faecalis	25	TXT SRA Run Selector	Cyprien Guérin	May 20, 2022
GSE194009	Taurocholate acid signals a specific gene expression reprogramming affecting amino-acids and nucleotides metabolisms	Expression profiling by high throughput sequencing	Enterococcus faecalis	20	TXT	Cyprien Guérin	May 20, 2022
GSE194011	Contrasted effects of deoxycholate and taurocholate bile acids on the gut pathobiont Enterococcus faecalis	Expression profiling by high throughput sequencing	Enterococcus faecalis	45		Cyprien Guérin	May 20, 2022
GSE198051	Transcriptomes of Enterococcus faecalis OG1RF and OG1RF Δbph in planktonic culture	Expression profiling by high throughput sequencing	Enterococcus faecalis	8	TXT	Julia Willett	Mar 12, 2022
GSE179348	Structural basis for PoxtA-mediated resistance to Phenicol and Oxazolidinone antibiotics	Other	Enterococcus faecalis	12	BEDGRAPH SRA Run Selector	Vicent Pelechano	Feb 12, 2022
GSE195652	Regulation of mannitol metabolism in Enterococcus faecalis and association with parEF0409 toxin-antitoxin locus function.	Expression profiling by high throughput sequencing	Enterococcus faecalis	6	XLSX	SRIVISHNUPRIYA ANBALAGAN	Feb 04, 2022
GSE189399	Deep mutational scan of a drug efflux pump reveals its structure-function landscape	Other	Enterococcus faecalis	21	CSV SRA Run Selector	Gianmarco Meier	Nov 25, 2021