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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterEscherichia coli str. K-12 substr. MG1655
GSE270160
De novo gene synthesis by an antiviral reverse transcriptase [cDIP-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
36 Samuel Henry Sternberg Aug 11, 2024
GSE270161
De novo gene synthesis by an antiviral reverse transcriptase [RIP-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
36 Samuel Henry Sternberg Aug 11, 2024
GSE270162
De novo gene synthesis by an antiviral reverse transcriptase [RNA-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
3 Samuel Henry Sternberg Aug 11, 2024
GSE270164
De novo gene synthesis by an antiviral reverse transcriptase
  • Link icon Escherichia coli str. K-12 substr. MG1655
75 Samuel Henry Sternberg Aug 11, 2024
GSE211823
Systematic Study on the Three-Dimensional Genome of Escherichia Coli and Its Thermal Adaptation Mechanism (3C-Seq)
  • Link icon Escherichia coli str. K-12 substr. MG1655
10 Xuting Wang Jun 21, 2024
GSE211824
Systematic Study on the Three-Dimensional Genome of Escherichia Coli and Its Thermal Adaptation Mechanism (RNA-Seq)
  • Link icon Escherichia coli str. K-12 substr. MG1655
12 Xuting Wang Jun 21, 2024
GSE211825
Spatial Chromosome Organization and Adaptation of Escherichia coli under Heat Stress
  • Link icon Escherichia coli str. K-12 substr. MG1655
22 binguang ma Jun 19, 2024
GSE267827
Genome-scale CRISPRi screen identifies pcnB repression conferring improved physiology for overproduction of free fatty acids in Escherichia coli II
  • Link icon Escherichia coli str. K-12 substr. MG1655
5 Lixia Fang May 26, 2024
GSE267710
Genome-scale CRISPRi screen identifies pcnB repression conferring improved physiology for overproduction of free fatty acids in Escherichia coli
  • Link icon Escherichia coli str. K-12 substr. MG1655
6 Lixia Fang May 21, 2024
GSE260455
Motility-activating mutations upstream of flhDC reduce acid shock survival of Escherichia coli
12 Kilian Schumacher Apr 14, 2024
GSE200448
Deep sequencing and fitness calculation for plasmids carrying the CREATE cassette from the enriched tolerant strains under different pressures by using Illumina protocol
  • Link icon Escherichia coli str. K-12 substr. MG1655
5 Yangyang Zheng Apr 01, 2024
GSE241319
Bacterial Stress Bodies – Ancestral Condensates Regulating RNA Turnover and Protein Translation II
  • Link icon Escherichia coli str. K-12 substr. MG1655
56 Lydia Freddolino Apr 01, 2024
GSE241321
Bacterial Stress Bodies – Ancestral Condensates Regulating RNA Turnover and Protein Translation III
  • Link icon Escherichia coli str. K-12 substr. MG1655
42 Lydia Freddolino Apr 01, 2024
GSE241322
Bacterial Stress Bodies – Ancestral Condensates Regulating RNA Turnover and Protein Translation
102 Lydia Freddolino Apr 01, 2024
GSE226936
ENVIRONMENT MODULATES PROTEIN HETEROGENEITY THROUGH TRANSCRIPTIONAL AND TRANSLATIONAL STOP CODON RECODING
  • Link icon Escherichia coli str. K-12 substr. MG1655
13 Agnes Toth-Petroczy Mar 28, 2024
GSE249682
SOS Genes Are Rapidly Induced While Mutagenesis Is Temporally Regulated by Changes in Protein Activation and Nucleotide Pools After a Sub-lethal Dose of Ciprofloxacin in Escherichia coli
  • Link icon Escherichia coli str. K-12 substr. MG1655
42 Amanda Holstad Singleton Mar 26, 2024
GSE239502
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [ChIP-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
6 Xiaodan Yan Feb 20, 2024
GSE239503
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [RNA-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
1 Xiaodan Yan Feb 20, 2024
GSE239504
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [scRNA-seq]
14 Xiaodan Yan Feb 20, 2024
GSE239505
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm.
21 Xiaodan Yan Feb 20, 2024