GEO Browser - GEO

Series

Samples

Platforms

DataSets

59 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum
GSE190497	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq I)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	11	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE190519	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	59	BED BW TAR	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE230206	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq II)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	32	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE224073	Genome-wide binding sites of MCM6 in Plasmodium falciparum	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	2	BROADPEAK	Shashank Shekhar	Jul 29, 2023
GSE197916	Metabolic competition between lipid metabolism and histone methylation regulates sexual differentiation in human malaria parasites	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	30	BED BEDGRAPH	Bjorn FC Kafsack	Jul 01, 2023
GSE214535	Chromatin profiling of H3R2me2s in human malaria parasite	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	6	XLSX	JUN MIAO	Jun 28, 2023
GSE215426	Histone post translation modification differences during the Plasmodium schizont-to-ring transition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium berghei Plasmodium falciparum	28	BW	Evelien M Bunnik	Jun 06, 2023
GSE215429	Histone post translation modification and Transcriptional differences during the Plasmodium schizont-to-ring transition	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Plasmodium berghei Plasmodium falciparum	34	BW	Evelien M Bunnik	Jun 06, 2023
GSE208757	Replication origin mapping in the malaria parasite Plasmodium falciparum	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	4	BW NARROWPEAK	Richard Bartfai	Jan 30, 2023
GSE208560	Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	25	BEDGRAPH NARROWPEAK	Lucas Michel-Todó	Nov 03, 2022
GSE208561	Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	43	BEDGRAPH NARROWPEAK TXT	Lucas Michel-Todó	Nov 03, 2022
GSE210062	Global Profiling of Histone Modifications in Plasmodium falciparum using CUT&RUN.	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Plasmodium falciparum	9	BW TXT	Bjorn FC Kafsack	Aug 01, 2022
GSE208155	Identification of antimalarial compounds that inhibit Apicomplexan AP2 transcription factor proteins in the human malaria parasite Plasmodium falciparum [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	8	BIGWIG NARROWPEAK	Timothy J Russell	Jul 15, 2022
GSE202214	ChIP-Seq analysis of day 6 male and female gametocytes of the malaria parasite Plasmodium falciparum	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	54	BW	Michaela Petter	May 07, 2022
GSE184658	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	144	BED BW SRA Run Selector	Mei Jiang	Mar 06, 2022
GSE184659	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	192	BED BW	Mei Jiang	Mar 06, 2022
GSE180437	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	3	BED BW SRA Run Selector	Mei Jiang	Feb 02, 2022
GSE180438	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	15	BED BW	Mei Jiang	Feb 02, 2022
GSE189151	Transcriptional regulator HDP1 regulates expansion of the inner membrane complex during early sexual differentiation of malaria parasites [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	4	BEDGRAPH NARROWPEAK	Bjorn FC Kafsack	Nov 21, 2021
GSE189197	Transcriptional regulator HDP1 regulates expansion of the inner membrane complex during early sexual differentiation of malaria parasites	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	7		Bjorn FC Kafsack	Nov 21, 2021