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| Status |
Public on Nov 03, 2022 |
| Title |
Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci |
| Organism |
Plasmodium falciparum |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
36515553 |
| Submission date |
Jul 19, 2022 |
| Last update date |
Feb 02, 2023 |
| Contact name |
Lucas Michel-Todó |
| E-mail(s) |
lucas.michel@isglobal.org
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| Organization name |
ISGlobal
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| Department |
Malaria Epigenetics
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| Street address |
Roselló, 149
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| City |
Barcelona |
| State/province |
Barcelona |
| ZIP/Postal code |
08036 |
| Country |
Spain |
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| Platforms (2) |
| GPL21078 |
Illumina HiSeq 2500 (Plasmodium falciparum) |
| GPL26985 |
Agilent-085763 Pfalciparum15KArray_Sept18 |
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| Samples (43)
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| GSM6337846 |
A7, timepoint 37-42 hpi |
| GSM6337847 |
A7, timepoint 40-45 hpi |
| GSM6337848 |
A7, timepoint 43-48 hpi |
| GSM6337849 |
E5, timepoint 10-15 hpi |
| GSM6337850 |
E5, timepoint 20-25 hpi |
| GSM6337851 |
E5, timepoint 30-35 hpi |
| GSM6337852 |
E5, timepoint 37-42 hpi |
| GSM6337853 |
E5, timepoint 40-45 hpi |
| GSM6337854 |
E5, timepoint 43-48 hpi |
| GSM6337855 |
B11, timepoint 10-15 hpi |
| GSM6337856 |
B11, timepoint 20-25 hpi |
| GSM6337857 |
B11, timepoint 30-35 hpi |
| GSM6337858 |
B11, timepoint 37-42 hpi |
| GSM6337859 |
B11, timepoint 40-45 hpi |
| GSM6337860 |
B11, timepoint 43-48 hpi |
| GSM6351370 |
1.2B H3K9me3 |
| GSM6351371 |
1.2B H3K9ac |
| GSM6351372 |
1.2B input |
| GSM6351373 |
10G H3K9me3 |
| GSM6351374 |
10G H3K9ac |
| GSM6351375 |
10G input |
| GSM6351376 |
A7 H3K9me3 |
| GSM6351377 |
A7 input |
| GSM6351378 |
E5 H3K9me3 |
| GSM6351379 |
E5 input |
| GSM6351380 |
B11 H3K9me3 |
| GSM6351381 |
B11 H3K9ac |
| GSM6351382 |
B11 input |
| GSM6351383 |
NF54 H3K9me3 |
| GSM6351384 |
NF54 H3K9ac |
| GSM6351385 |
NF54 input |
| GSM6351386 |
NF54-V63 H3K9me3 |
| GSM6351387 |
NF54-V63 H3K9me3_short R1 |
| GSM6351388 |
NF54-V63 input |
| GSM6351389 |
3D7-Imp H3K9me3 |
| GSM6351390 |
3D7-Imp H3K9ac |
| GSM6351391 |
3D7-Imp input |
| GSM6351392 |
E5-PfAP2-G-HA H3K9me3 |
| GSM6351393 |
E5-PfAP2-G-HA H3K9ac |
| GSM6351394 |
E5-PfAP2-G-HA input |
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| This SuperSeries is composed of the following SubSeries: |
| GSE208131 |
Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci [gene expression] |
| GSE208560 |
Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci [ChIP-seq] |
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| Relations |
| BioProject |
PRJNA860104 |
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