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49 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila virilis
GSE269951	Temporal dynamics of gene expression during metamorphosis in two distant Drosophila species	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis	60	CSV	Aleksandra M Ozerova	Jun 17, 2024
GSE225887	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [RNA-Seq]	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila bifasciata Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	35	BW	Susanne Bornelöv	Sep 26, 2023
GSE225888	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [small RNA-Seq]	Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila bifasciata Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	65	BW	Susanne Bornelöv	Sep 26, 2023
GSE225889	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	118	BW NARROWPEAK	Susanne Bornelöv	Sep 26, 2023
GSE214704	Chromosome-level organization of the regulatory genome in the Drosophila nervous system [Hi-C]	Other	Drosophila melanogaster Drosophila virilis	30	MCOOL	Maria Cristina Gambetta	Aug 01, 2023
GSE214707	Chromosome-level organization of the regulatory genome in the Drosophila nervous system	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis	34	BED CSV H5 MCOOL TSV	Maria Cristina Gambetta	Aug 01, 2023
GSE165833	Diverging principles of selective sex chromosome regulation during evolution of Drosophila	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis	73	BW SRA Run Selector	Tobias Straub	Jul 07, 2021
GSE59707	Evolutionary changes in cis regulation are associated with altered chromatin activity and gene expression levels in the Drosophila eye development (RNA-Seq)	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	27	TXT SRA Run Selector	Stein Aerts	May 02, 2020
GSE124142	Total RNA from different species fly heads	Expression profiling by high throughput sequencing	Drosophila simulans Drosophila virilis Drosophila yakuba	18	TXT SRA Run Selector	Sebastian Kadener	Dec 03, 2019
GSE124136	Differences in circadian rhythms in fly at different temperatures	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster Drosophila simulans Drosophila virilis Drosophila yakuba	104	CEL	Sebastian Kadener	Dec 02, 2019
GSE120750	Hi-C guided assemblies reveal conserved regulatory topologies on X and autosomes despite extensive genome shuffling [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila busckii Drosophila virilis	12	BW SRA Run Selector	Asifa Akhtar	Oct 14, 2019
GSE120751	Hi-C guided assemblies reveal conserved regulatory topologies on X and autosomes despite extensive genome shuffling [HiC]	Other Third-party reanalysis	Drosophila busckii Drosophila melanogaster Drosophila virilis	5	BED FA GTF H5 TXT SRA Run Selector	Asifa Akhtar	Oct 14, 2019
GSE120752	Hi-C guided assemblies reveal conserved regulatory topologies on X and autosomes despite extensive genome shuffling	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila busckii Drosophila melanogaster Drosophila virilis	17	BED BW H5	Asifa Akhtar	Oct 14, 2019
GSE112858	Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo	Expression profiling by high throughput sequencing Third-party reanalysis	Drosophila ananassae Drosophila erecta Drosophila mauritiana Drosophila melanogaster Drosophila miranda Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila santomea Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	119	TXT	Susan E. Lott	Dec 04, 2018
GSE102439	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [evolutionary study]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	24	BW SRA Run Selector	Jelle Jacobs	Jun 04, 2018
GSE102441	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba Homo sapiens	175	BW	Jelle Jacobs	Jun 04, 2018
GSE108298	Stochastic gain of susceptibility suggests a novel mechanism of resistance to hybrid dysgenesis in Drosophila virilis	Non-coding RNA profiling by high throughput sequencing	Drosophila virilis	19	XLSX SRA Run Selector	Sergei Funikov	Dec 20, 2017
GSE107390	miR-975 overexpression effect on Drosophila cell lines	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila simulans Drosophila virilis	12	TXT SRA Run Selector	Yang Lyu	Nov 30, 2017
GSE98013	Small RNAs from 11 Drosophila species	Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila grimshawi Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	56	TXT SRA Run Selector	Jaaved Mohammed	Nov 20, 2017
GSE101603	Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis Drosophila yakuba	44	BW TAB SRA Run Selector	Jiayu Wen	Oct 31, 2017