GEO Browser - GEO

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21 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL13310
GSE100837	Comparative transcriptomics in the Drosophila Auditory Organ	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	5	TXT SRA Run Selector	Stein Aerts	Jul 05, 2020
GSE59707	Evolutionary changes in cis regulation are associated with altered chromatin activity and gene expression levels in the Drosophila eye development (RNA-Seq)	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	27	TXT SRA Run Selector	Stein Aerts	May 02, 2020
GSE112858	Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo	Expression profiling by high throughput sequencing Third-party reanalysis	Drosophila ananassae Drosophila erecta Drosophila mauritiana Drosophila melanogaster Drosophila miranda Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila santomea Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	119	TXT	Susan E. Lott	Dec 04, 2018
GSE102439	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [evolutionary study]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	24	BW SRA Run Selector	Jelle Jacobs	Jun 04, 2018
GSE102441	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba Homo sapiens	175	BW	Jelle Jacobs	Jun 04, 2018
GSE89300	Drosophila pseudoobscura embryonic development RAMPAGE time series	Expression profiling by high throughput sequencing	Drosophila pseudoobscura	29	BED BW TXT SRA Run Selector	Philippe Batut	Dec 19, 2017
GSE89335	Drosophila species embryonic development RAMPAGE time series	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans	119	BW	Philippe Batut	Dec 19, 2017
GSE98013	Small RNAs from 11 Drosophila species	Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila grimshawi Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	56	TXT SRA Run Selector	Jaaved Mohammed	Nov 20, 2017
GSE99574	RNA-seq of sexed adult tissues/body parts from eight Drosophila species	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila virilis Drosophila willistoni Drosophila yakuba synthetic construct	856	PDF TXT SRA Run Selector	Brian Oliver	Jun 02, 2017
GSE86055	Evolution of A-to-I RNA Editing in Drosophila	Expression profiling by high throughput sequencing Other	Drosophila ananassae Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	52	TXT SRA Run Selector	Jin Billy Li	Jan 04, 2017
GSE86056	A-to-I RNA Editing in Drosophila	Expression profiling by high throughput sequencing Other	Drosophila ananassae Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	66	TXT	Jin Billy Li	Jan 04, 2017
GSE59706	Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis	4	BW TXT SRA Run Selector	Stein Aerts	Jun 17, 2015
GSE68062	Sex bias and maternal contribution to gene expression divergence in Drosophila blastoderm embryos	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis Drosophila yakuba	31	TXT SRA Run Selector	Mathilde Paris	Apr 21, 2015
GSE63333	Genome-wide binding patterns of group B Sox proteins in four Drosophila species	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	30	BED BEDGRAPH SRA Run Selector	Sarah Carl	Nov 18, 2014
GSE48251	Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila pseudoobscura Drosophila willistoni Drosophila yakuba	18	TXT SRA Run Selector	Daniel Gerlach	Apr 28, 2014
GSE53483	Sex-specific embryonic gene expression in species with newly evolved sex chromosomes	Expression profiling by high throughput sequencing	Drosophila miranda Drosophila pseudoobscura	96	TXT SRA Run Selector	Susan E. Lott	Feb 14, 2014
GSE48017	New microRNAs in Drosophila	Non-coding RNA profiling by high throughput sequencing	Drosophila pseudoobscura Drosophila simulans	5	TXT SRA Run Selector	Yang Lyu	Dec 31, 2013
GSE52058	Identification of sex-biased genes in Drosophila using gonad RNAseq data	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila pseudoobscura Drosophila yakuba	13	DIFF TXT SRA Run Selector	Maria D Vibranovski	Nov 04, 2013
GSE44612	Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila biarmipes Drosophila bipectinata Drosophila elegans Drosophila eugracilis Drosophila ficusphila Drosophila kikkawai Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila rhopaloa Drosophila simulans Drosophila takahashii Drosophila virilis Drosophila yakuba	93	BAM BED RPKM TXT	Brian Oliver	Feb 25, 2013
GSE31302	RNA-Seq of Gonads and Carcasses in D. simulans and D. pseudoobscura	Expression profiling by high throughput sequencing	Drosophila pseudoobscura Drosophila simulans	17	BAM SRA Run Selector	Brian Oliver	Aug 26, 2011