GEO Browser - GEO

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38 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Haemophilus influenzae
GSE230367	NTHi infection of Normal Human Nasal Epithelia (NHNE) for 14 days	Expression profiling by high throughput sequencing	Haemophilus influenzae Homo sapiens	28	TXT	Ulrike Kappler	Jun 05, 2024
GSE224064	The involvement of CdhR in Porphyromonas gingivalis during Nitric Oxide stress [microarray]	Expression profiling by array	Haemophilus influenzae Porphyromonas gingivalis W83	12	XLS	Marie-Claire Boutrin	Feb 03, 2023
GSE224067	The involvement of CdhR in Porphyromonas gingivalis during Nitric Oxide stress	Expression profiling by array Expression profiling by high throughput sequencing	Haemophilus influenzae Porphyromonas gingivalis Porphyromonas gingivalis W83	24		Marie-Claire Boutrin	Feb 03, 2023
GSE180166	Dual RNASeq reveals NTHi-macrophage transcriptomic changes during intracellular persistence	Expression profiling by high throughput sequencing	Haemophilus influenzae Homo sapiens	20	TXT SRA Run Selector	Jodie Ackland	Aug 23, 2021
GSE152295	RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bacterial Infections	Expression profiling by high throughput sequencing	Achromobacter xylosoxidans Acinetobacter baumannii Aggregatibacter actinomycetemcomitans Borreliella burgdorferi Burkholderia pseudomallei Campylobacter jejuni Enterococcus faecalis Escherichia coli Francisella tularensis Haemophilus influenzae Helicobacter pylori Klebsiella pneumoniae Legionella pneumophila Listeria monocytogenes Mycobacterium tuberculosis Neisseria gonorrhoeae Neisseria meningitidis Pseudomonas aeruginosa Salmonella enterica Shigella flexneri Staphylococcus aureus subsp. aureus MRSA252 Staphylococcus aureus subsp. aureus MSSA476 Staphylococcus epidermidis Streptococcus agalactiae Streptococcus pneumoniae Streptococcus pyogenes Streptococcus suis Vibrio cholerae Yersinia pseudotuberculosis	1122	TXT SRA Run Selector	Kemal Avican	Apr 23, 2021
GSE106187	RNA SEQ NTHi modA2	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Oct 25, 2020
GSE131505	Sustained reprioritization of metabolic pathways is associated with persistence and biofilm formation in non-typeable Haemophilus influenzae	Expression profiling by high throughput sequencing	Haemophilus influenzae	8	TXT SRA Run Selector	Alistair Harrison	Sep 24, 2019
GSE129761	RNA SEQ NTHi modA15	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Apr 13, 2019
GSE129764	RNA SEQ NTHi modA18	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Apr 13, 2019
GSE121832	Haemophilus influenzae strain C486 RNA SEQ NTHi modA4	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Nov 01, 2018
GSE121833	Haemophilus influenzae strain 477 RNA SEQ NTHi modA5	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Nov 01, 2018
GSE121834	Haemophilus influenzae strain 1209 RNA SEQ NTHi modA9	Expression profiling by high throughput sequencing	Haemophilus influenzae	6	TXT SRA Run Selector	John Michael Atack	Nov 01, 2018
GSE121835	RNA Seq to study gene expression changes mediated by phase-variable DNA methyltransferases in non-typeable Haemophilus influenzae	Expression profiling by high throughput sequencing	Haemophilus influenzae	18		John Michael Atack	Nov 01, 2018
GSE63900	Dual RNA-sequencing of nontypeable Haemophilus influenzae and host cell transcriptomes reveals new aspects of host-pathogen interface	Expression profiling by high throughput sequencing	Haemophilus influenzae Homo sapiens	24	TXT SRA Run Selector	Raffaele A Calogero	Nov 02, 2015
GSE73349	Phasevarion of non-typeable Haemophilus influenzae R2866	Expression profiling by array	Haemophilus influenzae Haemophilus influenzae R2866	10	XLSX	Timothy M VanWagoner	Sep 24, 2015
GSE58890	Haemophilus influenzae 86-028NP	Expression profiling by high throughput sequencing	Haemophilus influenzae	9	XLSX SRA Run Selector	Alistair Harrison	Jul 01, 2015
GSE70172	Expression analysis of a full SlrV locus 1 knockout in Haemophilus influenzae strain PittII	Expression profiling by array	Haemophilus influenzae Haemophilus influenzae PittII	8	PAIR	Benjamin Janto	Jun 23, 2015
GSE69831	A biphasic epigenetic switch controls immunoevasion, virulence and niche adapatation in non-typeable Haemophilus influenzae	Expression profiling by array	Haemophilus influenzae	4	TXT	Sean M Grimmond	Jun 12, 2015
GSE65277	Autoimmune peptide antigen reactivity in normal B6 mice Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2	XLSX	Jennie Hamilton	Feb 28, 2015
GSE65278	Autoimmune peptide antigen reactivity in BXD2 mice with spontaneous systemic autoimmune disease Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2	XLSX	Jennie Hamilton	Feb 28, 2015