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12974 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					BW
GSE21161	Widespread transcription at neuronal activity-regulated enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH BW SRA Run Selector	jesse M gray	Apr 15, 2010
GSE21812	Hoxc9 ChIP-seq in differentiating motor neurons	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BW TXT SRA Run Selector	Shaun Mahony	Sep 08, 2010
GSE23436	Histone methylation and transcription factor binding during intestinal cell differentation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	17	BED BW CEL TXT SRA Run Selector	Michael P Verzi	Nov 17, 2010
GSE24166	Chromatin enrichment of TRIM24, estrogen receptor and H3K4me2 in estrogen-treated and -untreated MCF7 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED BW SRA Run Selector	Bruce J Aronow	Sep 17, 2010
GSE24852	ChIP-Seq of Myf5, MyoD, Snai1, HDAC1, HDAC2, E47 and empty vector controls in mouse skeletal myoblasts or myotubes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW TXT SRA Run Selector	Ottawa Hospital Research Institute	Jul 05, 2012
GSE24904	Snail regulates MyoD binding-site occupancy to direct enhancer switching and differentiation-specific transcription in myogenesis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BW CEL TXT	Ottawa Hospital Research Institute	Jul 05, 2012
GSE28453	Dynamics of Sox2 and Esrrb occupancy during the differentiation of embryonic stem cells into trophoblast stem cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW SRA Run Selector	Itoshi NIKAIDO	Oct 17, 2013
GSE28455	Sox2-regulatory networks in embryonic and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW CEL	Itoshi NIKAIDO	Oct 17, 2013
GSE28561	Genome-wide maps of HLH-1 binding in muscle-enriched embryos.	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BB BW	Diane E Trout	Jun 22, 2012
GSE28562	Genome-wide RNA expression in muscle-enriched embryos across different mutations.	Expression profiling by high throughput sequencing	Caenorhabditis elegans	11	BB BW	Diane E Trout	Jun 22, 2012
GSE28563	HLH-1 binding in muscle-enriched embryos and RNA expression in muscle-enriched embryos across different mutations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	15	BB BW	Diane E Trout	Jun 22, 2012
GSE29282	A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BED BW TXT WIG SRA Run Selector	Katerina Hatzi	Aug 05, 2013
GSE29514	The transcriptional program controlled by Runx1 during early hematopoietic development (ChIP-seq data)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW TXT SRA Run Selector	Anagha M Joshi	May 30, 2012
GSE29515	The transcriptional program controlled by Runx1 during early hematopoietic development	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW CEL CHP TXT	Anagha M Joshi	May 30, 2012
GSE29714	Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT SRA Run Selector	Christopher E Mason	May 17, 2012
GSE30641	Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BW SAM SRA Run Selector	Justin Cotney	Mar 16, 2012
GSE30765	Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA-sequencing	Expression profiling by high throughput sequencing	Mus musculus	12	BW SAM SRA Run Selector	Albert E. Ayoub	Aug 22, 2011
GSE31015	A role for Snf2 related nucleosome spacing enzymes in genome-wide nucleosome organization	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	5	BW SRA Run Selector	Triantafyllos Gkikopoulos	Sep 16, 2011
GSE31320	Genome-wide identification of functional elements regulated by T-bet and GATA3 in human T-cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BED BW TXT SRA Run Selector	Aditi Kanhere	Nov 16, 2012
GSE31456	Transcriptional mechanisms controlling direct motor neuron programming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BAM BED BW CEL TXT WIG SRA Run Selector	Shaun Mahony	Jul 04, 2013