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58 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nothobranchius furzeri
GSE195869	Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species	Methylation profiling by high throughput sequencing	Abronia anzuetoi Acanthosaura Acanthurus triostegus Accipiter gentilis Accipiter nisus Acinonyx Acomys Acryllium vulturinum Agapornis Agapornis canus Agapornis lilianae Agapornis personatus Agapornis taranta Ailurus fulgens Alectis ciliaris Alitta succinea Amandava subflava Amazona Amazona agilis Amblyglyphidodon leucogaster Ambystoma Ambystoma andersoni Ambystoma mexicanum Ammodytes dubius Ammodytes hexapterus Ammotragus Anas platyrhynchos Anoplopoma fimbria Antidorcas Antilope Aonyx cinereus Aotidae Aplonis panayensis Apodemus flavicollis Apodemus sylvaticus Apostichopus parvimensis Aptenodytes patagonicus Aquila heliaca Ara Ara ararauna Ardea Ariopsis felis Ascidiella aspersa Asio otus Astrochelys radiata Astrochelys yniphora Athene noctua Atherinomorus vaigiensis Axis axis Balearica pavonina Bathymaster signatus Batoidea Bison bonasus Boa constrictor Bodianus diana Boltenia echinata Boltenia ovifera Bos Boselaphus tragocamelus Bothriechis schlegelii Botryllus schlosseri Brachylophus Branchiostoma floridae Bubalus Bubo bubo Buteo Buteo buteo Buteo lagopus Bycanistes bucinator Cacatua alba Caiman yacare Callithrix jacchus Callocephalon fimbriatum Callorhinchus milii Caloenas nicobarica Calyptocephallela gayi Camelus dromedarius Camelus ferus Canis aureus Canis lupus Canis lupus familiaris Canis lupus lycaon Cantherhines pardalis Capra Capra aegagrus Capreolus capreolus Capricornis Capromyidae Capromys pilorides Carcharias taurus Cariamidae Carollia perspicillata Castoridae Casuarius casuarius Caviidae Cebinae Centropomus robalito Centropristis striata Centropyge heraldi Cephalopholis miniata Cercopithecus Cervidae Cervus elaphus Cervus nippon Chaetodon lineolatus Chaetodon lunula Chamaeleo calyptratus Chamaeleonidae Charadriidae Chauna torquata Cheilodipterus quinquelineatus Cheilopogon pinnatibarbatus californicus Chelydra serpentina Chiroxiphia pareola Chloris chloris Chloropsis Choerodon fasciatus Chromis punctipinnis Chrysopelea Ciconia ciconia Ciconiidae Ciona intestinalis Circus aeruginosus Circus cyaneus Cirrhilabrus lineatus Cirrhilabrus roseafascia Clavelina picta Clupea harengus Coccothraustes Coliiformes Colobus guereza Colobus polykomos Columba livia Columbidae Connochaetes Copsychus malabaricus Coracias cyanogaster Coracias garrulus Coris caudimacula Coris gaimard Cornufer guentheri Coronella austriaca Correlophus ciliatus Corucia zebrata Corvus Corvus corax Corvus corone Corvus frugilegus Coryphaenoides acrolepis Coturnix coturnix Coturnix delegorguei Cricetinae Cricetomyinae Cricetus Crocodylia Crotalus Cryptacanthodes maculatus Ctenochaetus striatus Cucumaria frondosa Cuora mccordi Cuora mouhotii Cyanocompsa brissonii Cyanoliseus patagonus Cyclopsitta diophthalma Cyclopterus lumpus Cyclura Cyclura cornuta Cygnus cygnus Cygnus melancoryphus Cynictis Cynomys Cynoscion regalis Cyprinus carpio Dama dama Danio rerio Dascyllus aruanus Dasypodidae Dendrocygna viduata Dinemellia Diodon hystrix Dolichotis Dolichotis patagonum Doryteuthis pealeii Dracaena guianensis Dromaius novaehollandiae Ducula bicolor Duttaphrynus melanostictus Echinarachnius parma Ecsenius Ecteinascidia turbinata Elephas maximus indicus Eliomys quercinus Elops affinis Embiotoca jacksoni Emydidae Equus Equus asinus asinus Equus zebra Erethizon Erinaceidae Erpeton Erythrura Esox lucius Eudyptes chrysocome Eunectes Euplectes Euplectes orix Eurypygidae Falco cherrug Falco peregrinus Falco tinnunculus Felis catus Felis silvestris Fistularia commersonii Folivora Fromia Fromia indica Furcifer pardalis Gadus chalcogrammus Gadus morhua Galeocerdo cuvier Gallicolumba Gallus Gallus gallus Garrulus glandarius Gekkonidae Geochelone Geoemyda spengleri Geopelia placida Geronticus eremita Giraffa giraffa Glis glis Glyptocephalus cynoglossus Glyptocephalus zachirus Graptemys Grus japonensis Grus paradisea Gymnothorax moringa Gypaetus Haemulon flavolineatum Haliaeetus albicilla Haliaeetus leucocephalus Halichoeres trimaculatus Halocynthia pyriformis Heleophrynidae Heloderma Hemilepidotus jordani Hemisphaeriodon Hemitragus Hemitripterus americanus Heterocephalus Hippoglossina oblonga Hippoglossoides elassodon Hippoglossoides platessoides Hippotragus Hippotragus equinus Histrio histrio Holothuria Holothuria atra Holothuria cinerascens Homarus americanus Hoplobatrachus tigerinus Hydrochoerus hydrochaeris Hypanus americanus Hypselecara coryphaenoides Hystricidae Iguanidae Illex illecebrosus Incilius alvarius Irena puella Jacanidae Jaculus Kobus Kobus leche Labroides bicolor Laemanctus Lagostomus maximus Lama glama Lampropeltis Lamprotornis chalcurus Leiocephalus Lemur Leontocebus fuscicollis Leontopithecus Leontopithecus chrysomelas Lepas anatifera Lepidopsetta polyxystra Leptailurus Leptoclinus maculatus Leptoptilos crumeniferus Lepus europaeus Lepus timidus Lethenteron camtschaticum Lethrinus atkinsoni Leucoraja erinacea Leucoraja ocellata Lissemys punctata Loligo vulgaris Lophius piscatorius Loriculus galgulus Loweina rara Loweina terminata Lumpenus lampretaeformis Lutjanus mahogoni Lutjanus quinquelineatus Lutra lutra Lynx lynx Lyrurus tetrix Lytechinus variegatus Macaca Macaca silenus Macaca sylvanus Macropodidae Macropus Macroscelidea Macroscelides proboscideus Magallana gigas Malacochersus Marmota Martes foina Meles meles Melopsittacus Merops apiaster Merops bullockoides Milvus milvus Mimus polyglottos Molgula citrina Monacanthidae Morone saxatilis Mullus surmuletus Mungos mungo Muntiacus Mus musculus Musophaga Musophagidae Mustela Mustela putorius Mustelidae Mustelus canis Mya arenaria Myocastor coypus Myoxocephalus octodecemspinosus Myzopsetta ferruginea Naja Nanger dama Nardoa novaecaledoniae Nasua Natrix tessellata Nectariniidae Negaprion brevirostris Neoniphon sammara Neurergus Notamacropus parma Notamacropus rufogriseus Nothobranchius furzeri Nyctereutes Nymphicus hollandicus Octopus vulgaris Onuxodon fowleri Ophioderma panamensis Ophiopteris papillosa Ophiothrix spiculata Oplurus Oryctolagus cuniculus Osteoglossum bicirrhosum Ostorhinchus aureus Ostorhinchus moluccensis Ostorhinchus rueppellii Ostrea edulis Otaria Ovis aries Ovis orientalis Oxycercichthys veliferus Oxycheilinus digramma Oxylebius pictus Pachyuromys Padda oryzivora Panthera leo Panthera onca Panthera pardus Panthera tigris Papio Papio hamadryas Paracanthurus hepatus Paracirrhites forsteri Paralichthys dentatus Parapercis xanthozona Paroedura picta Parupeneus spilurus Parus major Passer domesticus Patiria miniata Pelecanus Pelecanus crispus Penaeus Perdix perdix Petauridae Petaurus breviceps Phalacrocorax carbo Phascolarctos cinereus Phasianus colchicus Philomachus Phloeomys Phocidae Phodopus campbelli Phoenicopteriformes Photoblepharon palpebratum Phyllopteryx taeniolatus Picus viridis Pisaster brevispinus Pisaster giganteus Pithecia pithecia Pitta moluccensis Platax teira Plegadis falcinellus Pleoticus muelleri Pleurogrammus monopterygius Ploceus cucullatus Podothecus accipenserinus Pogona barbata Pollachius virens Polychrus marmoratus Polypedates otilophus Pomacentrus coelestis Pomatomus saltatrix Pongo Potamochoerus porcus Prionotus carolinus Pristigenys alta Probosciger aterrimus Procyon lotor Psammomys obesus Psarisomus dalhousiae Pseudanthias Pseudanthias ventralis Pseudobalistes fuscus Pseudomonacanthus peroni Psittacus Pterocaesio marri Pteropus Ptilinopus Ptilinopus pulchellus Puma concolor Pycnonotus barbatus Python molurus Python regius Pythonidae Pytilia melba Rangifer tarandus Rattus norvegicus Rattus rattus Recurvirostra avosetta Rhabdamia gracilis Rhacophorus reinwardtii Rhea americana Rhinecanthus aculeatus Rhinocerotidae Rhinogobiops nicholsii Rhinoptera bonasus Rhyticeros narcondami Riftia pachyptila Rollulus Rupicapra rupicapra Saccoglossus kowalevskii Saguinus Saguinus imperator Saguinus mystax Saguinus oedipus Saimiriinae Salmo salar Salmo trutta Salvelinus alpinus Salvelinus umbla Sarcophilus Sauromalus Scandentia Scincidae Sciurus vulgaris Scolopsis bilineata Scophthalmus aquosus Scopus umbretta Scyliorhinus retifer Sebastes atrovirens Sebastes borealis Sebastes caurinus Sebastes chrysomelas Sebastes constellatus Sebastes hopkinsi Sebastes miniatus Sebastes mystinus Sebastes norvegicus Sebastes ovalis Sebastes paucispinis Sebastes semicinctus Sebastolobus alascanus Semicossyphus pulcher Serinus Shinisaurus crocodilurus Spatula querquedula Spermophilus Spheniscus humboldti Sphoeroides maculatus Spinus spinus Squalus acanthias Stenotomus chrysops Stichopus chloronotus Strigiformes Strix aluco Strix uralensis Strongylocentrotus droebachiensis Strongylocentrotus purpuratus Struthio camelus Sturnus vulgaris Styela montereyensis Sufflamen chrysopterum Suricata Sus scrofa Sus scrofa domesticus Sylvia atricapilla Tamias Tamiops Tapirus Taurotragus Tayassuidae Terrapene Testudinidae Testudo hermanni Testudo kleinmanni Tetrao urogallus Tetrastes bonasia Theloderma Theropithecus gelada Thunnus albacares Thyonella gemmata Tiliqua rugosa Tiliqua scincoides Tinca tinca Tockus alboterminatus Tockus deckeni Tockus flavirostris Tockus nasutus Trachemys Trachemys scripta elegans Trachemys scripta scripta Trachyphonus erythrocephalus Tragelaphus angasii Tragelaphus spekii Tragulus javanicus Triglops scepticus Tringa totanus Trioceros jacksonii Tupaia Upupa epops Uraeginthus bengalus Uromastyx Uromastyx ocellata Urophycis tenuis Ursus Ursus arctos Vanellus armatus Varanus Varanus exanthematicus Varanus gouldii Varecia Vermilingua Vicugna Vicugna pacos Vidua paradisaea Vipera ammodytes Vipera berus Vulpes vulpes Xenagama wilmsi Xiphias gladius Yangochiroptera Yinpterochiroptera Zamenis longissimus Zaprora silenus Zenopsis conchifer Zoarces americanus Zosteropidae	3023	BED SRA Run Selector	Christoph Bock	Jun 18, 2022
GSE124638	Sequencing of Nothobranchius furzeri brain in two age groups	Expression profiling by high throughput sequencing Other	Nothobranchius furzeri	16	CSV XLS SRA Run Selector	JenAge Project	Jun 19, 2020
GSE150149	RNA-seq of the brain of Nothobranchius furzeri at different time points and strains (smallRNA)	Non-coding RNA profiling by high throughput sequencing	Nothobranchius furzeri	16	CSV SRA Run Selector	Marco Groth	Jun 19, 2020
GSE150318	Longitudinal RNA-Seq study of Nothobranchius furzeri fin biopsies	Expression profiling by high throughput sequencing	Nothobranchius furzeri	228	CSV SRA Run Selector	Philipp Koch	Jun 24, 2020
GSE190757	Genetic perturbation of AMP biosynthesis extends lifespan and restores metabolic health in a naturally short-lived vertebrate	Expression profiling by high throughput sequencing	Nothobranchius furzeri	68	CSV TXT SRA Run Selector	Itamar Harel	May 23, 2023
GSE207748	A cross-sectional study of gene expression in different strains of Nothobranchius furzeri	Expression profiling by high throughput sequencing	Nothobranchius furzeri	168	CSV	Philipp Koch	Oct 24, 2023
GSE216369	An automated feeding system for the African killifish reveals effects of dietary restriction on lifespan and allows scalable assessment of associative learning	Expression profiling by high throughput sequencing	Nothobranchius furzeri	32	CSV	Jingxun Chen	Oct 29, 2022
GSE218622	Signals from the reproductive system regulate somatic regeneration and vertebrate lifespan	Expression profiling by high throughput sequencing	Nothobranchius furzeri	23	CSV	Itamar Harel	Mar 06, 2024
GSE248739	The germline regulates longevity and somatic repair in a sex-specific manner (RNA-Seq)	Expression profiling by high throughput sequencing	Nothobranchius furzeri	28	CSV	Itamar Harel	Mar 06, 2024
GSE248741	The germline regulates longevity and somatic repair in a sex-specific manner	Expression profiling by high throughput sequencing	Nothobranchius furzeri	51	CSV	Itamar Harel	Mar 06, 2024
GSE263626	RNA sequencing of gonad tissue of Nothobranchius furzeri at different age in males and females	Expression profiling by high throughput sequencing	Nothobranchius furzeri	19	CSV	Philipp Koch	Apr 15, 2024
GSE103804	Sequencing of Nothobranchius furzeri (strain: MZM-04/10p) brain from Rotenone treated animals in two age groups	Expression profiling by high throughput sequencing	Nothobranchius furzeri	20	FA GTF XLS SRA Run Selector	JenAge Project	Oct 19, 2021
GSE218971	Chromosome conformation capture (Hi-C) of the turquoise killifish	Other	Nothobranchius furzeri	2	FASTA HIC	Itamar Harel	Mar 06, 2024
GSE260629	Positional information modulates transient regeneration-activated cell states during vertebrate appendage regeneration.	Expression profiling by high throughput sequencing	Nothobranchius furzeri	32	H5 TXT	Alejandro Sanchez Alvarado	Apr 01, 2024
GSE135129	Aging triggers H3K27 trimethylation hoarding in the chromatin of Nothobranchius furzeri skeletal muscle	Genome binding/occupancy profiling by high throughput sequencing	Nothobranchius furzeri	4	TDF SRA Run Selector	Seyed Mohammd Mahdi Rasa	Dec 02, 2019
GSE66712	RNA-seq of the killifish N.furzeri during normal aging (cross-sectional and longitudinal study) and treatment with rotenone	Expression profiling by high throughput sequencing	Nothobranchius furzeri	185	TXT SRA Run Selector	JenAge Project	Dec 03, 2015
GSE72584	RNA-seq of the killifish Nothobranchius furzeri strain MZM-0410	Expression profiling by high throughput sequencing	Nothobranchius furzeri	12	TXT SRA Run Selector	JenAge Project	Dec 03, 2015
GSE79825	RNA-seq of Nothobranchius furzeri (Nfu) brain after miR29 knock-down	Expression profiling by high throughput sequencing	Nothobranchius furzeri	8	TXT SRA Run Selector	JenAge Project	Jan 16, 2017
GSE92854	small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages), embryonic samples of N. furzeri and 6 other killifish species	Non-coding RNA profiling by high throughput sequencing	Iconisemion striatum Nothobranchius furzeri Nothobranchius kadleci Nothobranchius korthausae Nothobranchius kuhntae Nothobranchius pienaari Nothobranchius rachovii	169	TXT	Marco Groth	Feb 01, 2017
GSE104321	small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages) and Brain samples of 6 other killifish species	Non-coding RNA profiling by high throughput sequencing	Iconisemion striatum Nothobranchius furzeri Nothobranchius kadleci Nothobranchius korthausae Nothobranchius kuhntae Nothobranchius pienaari Nothobranchius rachovii	162	TXT SRA Run Selector	JenAge Project	Sep 29, 2017