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637 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			CSV		Prior to Apr 01, 2022
GSE145235	The spliceosome is an exploitable vulnerability in RB1-mutant cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	54	BIGWIG CSV SRA Run Selector	Yao Yu	Mar 31, 2022
GSE199672	SAFA RGG domain in chromatin accessibility regulation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BW CSV	Lili Cao	Mar 31, 2022
GSE199678	wild-type and SAFA-/- cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	30	BW CSV TXT	Lili Cao	Mar 31, 2022
GSE180532	Closed chromatin of the CXCR5 gene due to DNA hypermethylation limits trafficking potential of CD8+ T cells into B cell follicles during HIV-1 clade C infection	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	53	BED CSV SRA Run Selector	Werner Smidt	Mar 30, 2022
GSE186291	Single-cell ATAC of WT thymic IEL precursors (IELp)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 TBI TSV SRA Run Selector	Jia Nie	Mar 30, 2022
GSE164786	Defining Essential Regulators of Naïve Human Pluripotent Cell Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	39	CSV TXT SRA Run Selector	Felix Krueger	Mar 25, 2022
GSE199186	ATAC-seq chromatin accessibility profiling in pancreatic islets isolated from Arid1aFl/Fl ; MIP-rtTA control and Arid1aFl/Fl; MIP-rtTA; TRE-Cre mice (Arid1a βKO) with/without pancreatectomy.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	CSV	Hao Zhu	Mar 22, 2022
GSE171803	DUX4 is a multifunctional factor priming human embryonic genome activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	40	BED CSV SRA Run Selector	Shruti Bhagat	Mar 16, 2022
GSE168951	Transcriptional adaptation and enhancer rewiring promote metabolic resistance in BRAFmutated multiple myeloma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	36	BIGWIG CSV	Birgit Knoechel	Mar 13, 2022
GSE174533	Lamin B1 deletion in myeloid neoplasms alters hematopoietic cell fate and causes Pelger-Huët nuclear anomaly	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	22	BED BW CSV HIC RDS SRA Run Selector	Sergei Doulatov	Mar 11, 2022
GSE167934	Integrating transcription factor abundance with chromatin accessibility in human erythroid lineage commitment	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	CSV SRA Run Selector	Amy Chen	Mar 10, 2022
GSE179593	Human epigenetic and transcriptional T cell differentiation atlas for identifying functional T cell-specific enhancers [ATAC HD]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	217	CSV SRA Run Selector	E JOHN WHERRY	Mar 08, 2022
GSE179606	Human epigenetic and transcriptional T cell differentiation atlas for identifying functional T cell-specific enhancers [ATAC melanoma]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	54	CSV SRA Run Selector	E JOHN WHERRY	Mar 08, 2022
GSE195486	Ovarian cancer immunogenicity is governed by a narrow subset of progenitor tissue-resident memory T-cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	62	BED CSV MTX TSV	jiqiang yao	Mar 07, 2022
GSE186918	ATACseq of CFBE41o- stably expressing wild-type CFTR (WTBE) and F508del-CFTR (CFBE) cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	CSV SRA Run Selector	Jay Kolls	Mar 01, 2022
GSE178707	NEAT-seq: Simultaneous profiling of intra-nuclear proteins, chromatin accessibility, and gene expression in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	13	CSV H5 MTX RDS TSV SRA Run Selector	Amy Chen	Feb 27, 2022
GSE197289	Human and mouse trigeminal ganglia cell atlas implicates multiple cell types in migraine	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	36	CSV RDS	Lite Yang	Feb 26, 2022
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE197224	Integrating RNA-seq and assay for transposase-accessible chromatin by sequencing (ATAC-seq) predicts functionally-relevant chromatin regions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	12	BW CSV HTML NARROWPEAK TXT XLSX	Adrian Rothenfluh	Feb 23, 2022
GSE160264	Transcription factor-mediated intestinal metaplasia and the role of a shadow enhancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	44	BW CSV SRA Run Selector	Ramesh Shivdasani	Feb 21, 2022