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Platform GPL10732 Query DataSets for GPL10732
Status Public on Jul 30, 2010
Title Mouse-Agilent-22K-D20030711
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer agilent
Manufacture protocol agilent technology
 
 
Contributor(s) Perou CM
Submission date Jul 27, 2010
Last update date Jul 17, 2015
Contact name Charles M. Perou
E-mail(s) cperou@med.unc.edu
Organization name University of North Carolina at Chapel Hill
Department Professor of Genetics, and Pathology & Laboratory Medicine; Lineberger Comprehensive Cancer Center
Street address 12-044 Lineberger Comprehensive Cancer Center CB# 7295
City Chapel Hill
State/province NC
ZIP/Postal code 27599-7264
Country USA
 
Samples (47) GSM571028, GSM571029, GSM571035, GSM571036, GSM661693, GSM661694 
Series (6)
GSE23214 MPA-induced gene expression and stromal and parenchymal gene expression profiles in luminal murine mammary tumors with different hormonal requirements
GSE27101 Comparative oncogenomics identifies breast tumors enriched in functional tumor initiating cells
GSE35722 Combined PI3K/mTOR and MEK Inhibition Provides Broad Anti-Tumor Activity in Faithful Murine Cancer Models

Data table header descriptions
ID
NAME probe name at UNC microarray database
Agilent_probe_name Agilent probe name
Gene ID Gene ID
Refseq ID Refseq ID
Genebank Accession Genebank accession number
Gene Symbol Gene Symbol
Gene Description Gene Description
Chromosome Number Chromosome Number
Chromosome Map Location Chromosome Map Location
SEQUENCE Probe Sequence
SPOT_ID
GB_LIST Refseq or GenBank accession list

Data table
ID NAME Agilent_probe_name Gene ID Refseq ID Genebank Accession Gene Symbol Gene Description Chromosome Number Chromosome Map Location SEQUENCE SPOT_ID GB_LIST
1 AGI_MM_OLIGO_(+)PRO25G-03 (+)PRO25G-03 --(+)PRO25G-03
2 AGI_MM_OLIGO_(+)PRO25G-03 (+)PRO25G-03 --(+)PRO25G-03
3 AGI_MM_OLIGO_(-)3XSLV1 (-)3XSLV1 --(-)3XSLV1
4 AGI_MM_OLIGO_A_51_P185156 A_51_P185156 228140 NM_001081260.2 BC025943 TNKS1BP1 tankyrase 1 binding protein 1 2 2 D ACAGAGACCAATGACATTTTACCACTTGAAACAATGAATAAAGTTTTTTGGGAATAAAAA NM_001081260.2
5 AGI_MM_OLIGO_A_51_P153113 A_51_P153113 75654 AK005653 1700003O08RIK RIKEN cDNA 1700003O08 gene 10 10 B3 GGACATTGATGAATTGAGGACTACAATATCAGACCGCTATGCTCAGGACATGGGAGACAA AK005653
6 AGI_MM_OLIGO_A_51_P113182 A_51_P113182 16880 NM_013584.2 NM_013584 LIFR leukemia inhibitory factor receptor 15 15 A1|15 4.6 cM AGAACAAACCAAATGACTAACCAGGTCACCCTTTGTCACTTCAGTCTGCCATCTCAGTAA NM_013584.2
7 AGI_MM_OLIGO_A_51_P335050 A_51_P335050 12116 NM_016668.3 NM_016668 BHMT betaine-homocysteine methyltransferase 13 13 D1 CCCCTGACTGTGGCAAACAGGGATTTATTGATCTCCCAGAATTCCCCTTTGGATTGGAAC NM_016668.3
8 AGI_MM_OLIGO_A_51_P287810 A_51_P287810 56615 NM_019946.4 NM_019946 MGST1 microsomal glutathione S-transferase 1 6 6 G1 CTCATGCACTTCAGAATCTTTGTAGGTGCTCGGATCTACCACACCATTGCTTACTTGACT NM_019946.4
9 AGI_MM_OLIGO_A_51_P256510 A_51_P256510 14904 NM_013818.2 NM_013818 GTPBP1 GTP binding protein 1 15 15 E3 AGCTCTGAGAGGATGTGCCCGATATTCCAGATCTCCAATGTCACAGGTGAGAACCTTGAC NM_013818.2
10 AGI_MM_OLIGO_A_51_P347103 A_51_P347103 17967 NM_001113204.1 X15052 NCAM1 neural cell adhesion molecule 1 9 9 A5.3|9 28.0 cM CAACTTCAGCTCCCTCTGCTAGCAATCTGTCCTCCACTGTCTTGGCTAACCAAGGAGCTG NM_001113204.1
11 AGI_MM_OLIGO_A_51_P225695 A_51_P225695 18798 BC051068 PLCB4 phospholipase C, beta 4 2 2 F3|2 77.0 cM GACAAAAGCTGTTTTCTTTGTGTTTCTTTTATGTATAGACACGGTGTTACCTGAAACCAC BC051068
12 AGI_MM_OLIGO_A_51_P366207 A_51_P366207 17954 NM_008671.1 NM_008671 NAP1L2 nucleosome assembly protein 1-like 2 X X D|X 42.5 cM CAGGCAAAATCATATTTATTATTGATAACAGCTAGTGCAAGGCTTCTGATTGTATGTGAC NM_008671.1
13 AGI_MM_OLIGO_A_51_P177721 A_51_P177721 78733 XM_912265.2|XM_283286.4 AK050381 TROAP trophinin associated protein 15 15 F3 TGCGTTTCGTTCCAATTGGCCCTGTGGTCCCACAGGACTCTCCATCATGACTCCGGTCTT XM_912265.2, XM_283286.4
14 AGI_MM_OLIGO_A_51_P368558 A_51_P368558 108160 NM_138607.2 NM_138607 D0HXS9928E DNA segment, human DXS9928E X X A7.3 GCAGGAAAAAATCAAGAGTGAAGAGATTGAAATCACCTTTAGTTACTGGGATGGCTCTGG NM_138607.2
15 AGI_MM_OLIGO_A_51_P391754 A_51_P391754 20652 NM_009230.3 NM_009230 SOAT1 sterol O-acyltransferase 1 1 1 G3|1 81.6 cM TACTAATAATCCCAAAATGGCTCCTAAGGCTCCAGAAGCTGGCTTCTGAAACATCTGCTC NM_009230.3
16 AGI_MM_OLIGO_(+)EQC-37 (+)EQC-37 --(+)EQC-37
17 AGI_MM_OLIGO_A_51_P435617 A_51_P435617 AK049492 AK049492.1 >gi|26093488|dbj|AK049492.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430017E22 product:unclassifiable, full insert sequence TATACATAGCTAGCATAGTTCTTGGTTTAAAAGTCTTAGTTTCTTAGGACTGGATGAAGG AK049492
18 AGI_MM_OLIGO_A_51_P238533 A_51_P238533 68018 AK020301 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 13 13 D1 TTGTCGTCGTTGTTCATCTACAGACTCAAAACATAATCATTTTAAAGTACCTTGGGAGTG AK020301
19 AGI_MM_OLIGO_A_51_P250058 A_51_P250058 13819 NM_010137.3 TC1463322 EPAS1 endothelial PAS domain protein 1 17 17 E4 TCCTGTCCATGTAACAACTTCATGACCATTACTGCATTGTCAAATTCCTACTGACGACAT NM_010137.3
20 AGI_MM_OLIGO_A_51_P328725 A_51_P328725 17691 NM_010831.2 NM_010831 SNF1LK SNF1-like kinase 17 17 B1|17 18.18 cM TCTAGTTGCTATCAACCCTTTGGGGGACAGTAACATCATGGTTTTTAGTTCTTGGGTTTT NM_010831.2

Total number of rows: 22575

Table truncated, full table size 5131 Kbytes.




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