GEO help: Mouse over screen elements for information.
Status
Public on Dec 01, 2010
Title
Bacillus subtilis Custom Agilent 44k v2
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Bacillus subtilis subsp. subtilis str. 168 Manufacturer
Agilent Technologies
Manufacture protocol
The arrays are produced by Agilent Technologies SurePrint technology (for details, see manufacturer's web site). Each protein coding gene of Bacillus subtilis str. 168 (GenBank record AL009126.2) is represented by 1 to 5 long oligonucleotides.
Description
Agilent-020670
Submission date
Sep 09, 2010
Last update date
Apr 06, 2016
Contact name
Ulrike Mäder
E-mail(s)
ulrike.maeder@uni-greifswald.de Organization name
University Medicine Greifswald
Department
Functional Genomics
Street address
F.-L.-Jahn-Str. 15A
City
Greifswald
ZIP/Postal code
D-17489
Country
Germany
Samples (83)
GSM591858 , GSM591859 , GSM591860 , GSM591861 , GSM591862 , GSM591863
GSM591864 ,
GSM591865 ,
GSM591866 ,
GSM591867 ,
GSM669626 ,
GSM669627 ,
GSM669628 ,
GSM669629 ,
GSM669630 ,
GSM669631 ,
GSM684862 ,
GSM684863 ,
GSM684864 ,
GSM714789 ,
GSM714790 ,
GSM714791 ,
GSM714792 ,
GSM714793 ,
GSM714794 ,
GSM714795 ,
GSM714796 ,
GSM714797 ,
GSM754762 ,
GSM754763 ,
GSM754765 ,
GSM754766 ,
GSM754767 ,
GSM754769 ,
GSM774609 ,
GSM774610 ,
GSM774611 ,
GSM774612 ,
GSM774613 ,
GSM774614 ,
GSM774615 ,
GSM774616 ,
GSM774617 ,
GSM774618 ,
GSM774619 ,
GSM774620 ,
GSM774621 ,
GSM774622 ,
GSM774623 ,
GSM774624 ,
GSM774625 ,
GSM774626 ,
GSM813527 ,
GSM813528 ,
GSM813529 ,
GSM813530 ,
GSM813531 ,
GSM813532 ,
GSM1289421 ,
GSM1289422 ,
GSM1289423 ,
GSM1289424 ,
GSM1289425 ,
GSM1289426 ,
GSM1289427 ,
GSM1289428 ,
GSM1289429 ,
GSM2067496 ,
GSM2067497 ,
GSM2067498 ,
GSM2067499 ,
GSM2067500 ,
GSM2067501 ,
GSM2067502 ,
GSM2067503 ,
GSM2067504 ,
GSM2067505 ,
GSM2067506 ,
GSM2067507 ,
GSM2067508 ,
GSM2067509 ,
GSM2067510 ,
GSM2067511 Series (9)
GSE24058 Transcriptome analysis of glucose starved Bacillus subtilis cells
GSE27113 Transcriptome analysis of Bacillus subtilis in response to physical plasma treatment
GSE27637 S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics
GSE28872 Phenotype Enhancement Screen of a Regulatory spx Mutant Unveils a Role for the ytpQ Gene in the Control of Iron Homeostasis.
GSE30430 RNA processing in Bacillus subtilis: Identification of targets of the essential RNase Y
GSE31249 Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis
GSE32865 Transcriptome analysis of Bacillus subtilis in response to air plasma treatment
GSE53333 Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge
GSE78108 Growth-rate-dependent gene expression in Bacillus subtilis
Data table header descriptions ID Probe Name custom probe name
SEQUENCE probe sequence
Feature genomic feature (gene name or IGR for intergenic region)
ORF ORF SPOT_ID
Data table ID Probe Name SEQUENCE Feature ORF ORF SPOT_ID 1
BSU14120_ykzF_1-59
TTGCGAATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCTGAA
ykzF
ykzF BSU14120 2
BSU18320_ppsC_5576-5630
TAACGAAAGAGAAATTTGTCCCACATCCATTTGCACCTGGCGATCGACTGTATCG
ppsC
ppsC BSU18320 3
yycF-purA_4153427-4154457_443-502
GAGCTACCGAGCCAAATGTTTTATTTTTCTCTACTAAGTAAAGTAAAATGGCGGTCCGGA
IGR
4
BSU21470_sunT_1362-1421
TTCCATAAGATTTTTTGACGTAGTAAACTATCCAGTTCAGCAAGATAGCAATGAGAATTT
sunT
sunT BSU21470 5
ykyA-pdhA_1527210-1527633_56-115
TTTCTATTGTAGTACAGCATAGTAAGGTATACTAGTACAGTTTTGGGTGCGGTTGGCATC
IGR
6
yoaV-yoaW_2046018-2046190_92-146
ACAATGAAAAAAGCTAATGTCTGCATGTAGACATTAGCTTGGCTGGCGTTTAGGC
IGR
7
inv_yczC-yccF_292817-293051_46-104
AATAACTTCTGAGGGCTTGGTTTCGGGCTAAAAAAGAATTTGGTAATGTGATAAGCTGG
IGR
8
ytrA-ytzC_3118289-3118614_256-315
AATACTTTGACTCACAAAGTCAATCCTTTTTTTACAAAAAAACGGACCCTTTTAAAAGGG
IGR
9
yjgD-yjhA_1288412-1288608_97-156
TGATGAATGAGATAGAAATAATCGTTACTTTCTTACCTGTTAAGAAAAGGGAAAATCTGA
IGR
10
ydiM-ydiN_653360-654526_937-996
ATGTTTTGGACAATTATTATACGCGATGGAATAGTTCGGTTAAAGAGCGACTAAAGGCGT
IGR
11
inv_yrdB-yrdA_2733370-2734179_513-572
AGCCTCCCAGGTATAATCTTTACTTCGTTCGACAAATTCTGCAAATTGTAGACAACTTCC
IGR
12
BSU38040_sacA_1266-1323
CATCAAGGATTTGCATACCGTACACATGTTTCTCGACGCGTCATCTGTGGAAATCTTT
sacA
sacA BSU38040 13
inv_menA-dltA_3950683-3951296_516-575
AAGGGAGAAGTCATTATGATAGATAAGGAAGCAAAAGGAGTTTTTTATTAAGCTGCCGGC
IGR
14
inv_secG-yvaM_3454354-3454502_56-114
TATCCGGCCTTTTGGCGTCTGATACAGCGTGACATGCCAACCCTTTTCATGTAAAATAG
IGR
15
BSU16780_ymfA_-28-28
AGACATATTTGTCGTTGATGCCGGCCTTATGCATCCAGAAAACGAAATGCTCGGTAT
ymfA
ymfA BSU16780 16
inv_ypmQ-ypmP_2291481-2291628_77-131
TCGAATACAAACATGGGACAGTAAGGACGGTTTTAGAAAGCGTTTTTATGCTGGC
IGR
17
inv_tatAC-yndA_1904768-1905018_132-189
CGTTTTATGAATCCGTCTTTGTGCTGGTTTTAAAATGTTCAAAATAAATGCATTCCCA
IGR
18
BSU03810_yclO_814-869
ATCATTGCGCTGGTCGGAGGGCAGTTTGTGGTTGAGAAAGTGTTTACCTTCTCAAC
yclO
yclO BSU03810 19
inv_hisZ-yvpB_3588391-3588641_163-222
TTCTTTCATCTGCTAACATATTATCATATTAGCGAACTAAAGGATTCGGAATTTTCCTTC
IGR
20
BSU17220_pksR_5764-5821
AAAAAAATTCCGGCCAGAGCGAGTATCAACAGCTATAGCTTTGGAGGCGTAAATGCGC
pksR
pksR BSU17220
41882 4342 Kbytes .Supplementary data files not provided
Less...
More...