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Status
Public on Sep 16, 2010
Title
Agilent-014810 Yeast Whole Genome ChIP-on-Chip Microarray 4x44K (G4493A) [Probe Name version]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Saccharomyces cerevisiae Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
*** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL4131.
Submission date
Sep 16, 2010
Last update date
Sep 07, 2013
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (349)
GSM594724 , GSM594725 , GSM594726 , GSM594727 , GSM696085 , GSM696086
GSM696087 ,
GSM696088 ,
GSM696089 ,
GSM696090 ,
GSM696091 ,
GSM696092 ,
GSM696093 ,
GSM696094 ,
GSM696095 ,
GSM696096 ,
GSM696097 ,
GSM696098 ,
GSM696099 ,
GSM696100 ,
GSM696101 ,
GSM696102 ,
GSM696105 ,
GSM696106 ,
GSM696107 ,
GSM696108 ,
GSM696109 ,
GSM696110 ,
GSM696111 ,
GSM696112 ,
GSM696113 ,
GSM696114 ,
GSM696115 ,
GSM696116 ,
GSM696117 ,
GSM696118 ,
GSM696119 ,
GSM696120 ,
GSM696121 ,
GSM696122 ,
GSM696123 ,
GSM696124 ,
GSM696125 ,
GSM696126 ,
GSM696127 ,
GSM696128 ,
GSM696130 ,
GSM696131 ,
GSM696132 ,
GSM696133 ,
GSM696134 ,
GSM696135 ,
GSM696136 ,
GSM696137 ,
GSM696138 ,
GSM696139 ,
GSM696140 ,
GSM696141 ,
GSM696142 ,
GSM696143 ,
GSM696144 ,
GSM696145 ,
GSM696146 ,
GSM696147 ,
GSM792577 ,
GSM792578 ,
GSM792579 ,
GSM792580 ,
GSM792581 ,
GSM792582 ,
GSM792583 ,
GSM792584 ,
GSM792585 ,
GSM792586 ,
GSM792587 ,
GSM792588 ,
GSM792589 ,
GSM792590 ,
GSM792591 ,
GSM792592 ,
GSM792593 ,
GSM792594 ,
GSM792595 ,
GSM792596 ,
GSM792597 ,
GSM792598 ,
GSM792599 ,
GSM792600 ,
GSM792601 ,
GSM792602 ,
GSM792603 ,
GSM792604 ,
GSM792605 ,
GSM792606 ,
GSM792607 ,
GSM792608 ,
GSM792609 ,
GSM792610 ,
GSM792611 ,
GSM792612 ,
GSM792613 ,
GSM792614 ,
GSM792615 ,
GSM792616 ,
GSM792617 ,
GSM792618 ,
GSM792619 ,
GSM792620 ,
GSM794521 ,
GSM794522 ,
GSM794523 ,
GSM794524 ,
GSM794525 ,
GSM794526 ,
GSM794527 ,
GSM794528 ,
GSM794529 ,
GSM794530 ,
GSM794531 ,
GSM794532 ,
GSM802435 ,
GSM802436 ,
GSM802437 ,
GSM802438 ,
GSM909258 ,
GSM909259 ,
GSM909260 ,
GSM909261 ,
GSM909262 ,
GSM909263 ,
GSM909264 ,
GSM909265 ,
GSM909266 ,
GSM909267 ,
GSM909268 ,
GSM909269 ,
GSM910733 ,
GSM910734 ,
GSM910735 ,
GSM955388 ,
GSM955389 ,
GSM955390 ,
GSM955391 ,
GSM955392 ,
GSM955393 ,
GSM955394 ,
GSM955395 ,
GSM955396 ,
GSM955397 ,
GSM955398 ,
GSM955399 ,
GSM955400 ,
GSM955401 ,
GSM955402 ,
GSM955403 ,
GSM955404 ,
GSM955405 ,
GSM955406 ,
GSM955407 ,
GSM955408 ,
GSM955409 ,
GSM955410 ,
GSM955411 ,
GSM955412 ,
GSM955413 ,
GSM955414 ,
GSM955415 ,
GSM955416 ,
GSM955417 ,
GSM955418 ,
GSM955419 ,
GSM955420 ,
GSM955421 ,
GSM955422 ,
GSM955423 ,
GSM1274277 ,
GSM1274278 ,
GSM1274279 ,
GSM1274280 ,
GSM1274281 ,
GSM1274282 ,
GSM1274283 ,
GSM1274284 ,
GSM1274285 ,
GSM1274286 ,
GSM1274287 ,
GSM1274288 ,
GSM1274289 ,
GSM1274290 ,
GSM1274291 ,
GSM1274292 ,
GSM1274293 ,
GSM1274294 ,
GSM1274295 ,
GSM1274296 ,
GSM1274297 ,
GSM1274298 ,
GSM1274299 ,
GSM1274300 ,
GSM1274301 ,
GSM1274302 ,
GSM1274303 ,
GSM1274304 ,
GSM1274305 ,
GSM1274306 ,
GSM1274307 ,
GSM1274308 ,
GSM1274309 ,
GSM1274310 ,
GSM1274311 ,
GSM1274312 ,
GSM1274313 ,
GSM1274314 ,
GSM1274315 ,
GSM1274316 ,
GSM1274317 ,
GSM1274318 ,
GSM1274319 ,
GSM1528140 ,
GSM1528141 ,
GSM1528142 ,
GSM1528143 ,
GSM1528144 ,
GSM1528145 ,
GSM1528146 ,
GSM1528147 ,
GSM1528148 ,
GSM1528149 ,
GSM1528150 ,
GSM1528151 ,
GSM1528152 ,
GSM1528153 ,
GSM1528154 ,
GSM1528155 ,
GSM1528156 ,
GSM1528157 ,
GSM1528158 ,
GSM1528159 ,
GSM1528160 ,
GSM1528161 ,
GSM1528162 ,
GSM1528163 ,
GSM1528164 ,
GSM1528165 ,
GSM1528166 ,
GSM1528167 ,
GSM1528168 ,
GSM1528169 ,
GSM1528170 ,
GSM1528171 ,
GSM1528172 ,
GSM1528173 ,
GSM1528174 ,
GSM1528175 ,
GSM1528176 ,
GSM1528177 ,
GSM1528178 ,
GSM1528179 ,
GSM1528180 ,
GSM1528181 ,
GSM1528182 ,
GSM1528183 ,
GSM1528184 ,
GSM1528185 ,
GSM1528186 ,
GSM1528187 ,
GSM1528188 ,
GSM1528189 ,
GSM1528190 ,
GSM1528191 ,
GSM1528192 ,
GSM1528193 ,
GSM1528194 ,
GSM1528195 ,
GSM1528196 ,
GSM1528197 ,
GSM1571308 ,
GSM1571309 ,
GSM1705202 ,
GSM1705203 ,
GSM1705204 ,
GSM1705205 ,
GSM1705206 ,
GSM1705207 ,
GSM1705208 ,
GSM1705209 ,
GSM1705210 ,
GSM1705211 ,
GSM1705212 ,
GSM1705213 ,
GSM1705214 ,
GSM1705215 ,
GSM1705216 ,
GSM1705217 ,
GSM1705218 ,
GSM1705219 ,
GSM1705220 ,
GSM1705221 ,
GSM1705222 ,
GSM1705223 ,
GSM1705224 ,
GSM1705225 ,
GSM1705226 ,
GSM1705227 ,
GSM1705228 ,
GSM1705229 ,
GSM2042516 ,
GSM2042517 ,
GSM2042518 ,
GSM2042519 ,
GSM2042520 ,
GSM2042521 ,
GSM2042522 ,
GSM2042523 ,
GSM2805248 ,
GSM2805249 ,
GSM2805250 ,
GSM2805251 ,
GSM4592291 ,
GSM4592292 ,
GSM4592293 ,
GSM4592294 ,
GSM4592295 ,
GSM4592296 ,
GSM4592297 ,
GSM4592298 ,
GSM4874318 ,
GSM4874319 ,
GSM4874320 ,
GSM4874321 ,
GSM5081983 ,
GSM5081984 ,
GSM5081985 ,
GSM5081986 ,
GSM5081987 ,
GSM5081988 ,
GSM5081989 ,
GSM5081990 ,
GSM6204752 ,
GSM6204753 ,
GSM6204754 ,
GSM6204755 ,
GSM6204756 ,
GSM6204757 ,
GSM6204758 ,
GSM6204759 ,
GSM6204760 ,
GSM6204761 ,
GSM6204762 Series (26)
GSE15818 Coeevolution of a transcriptional network by compensatory trans and cis mutations
GSE28096 Histone exchange and histone H4 acetylation in wild-type and SET2 deletion yeast strains
GSE28097 Histone acetylation in wild-type and SET2 deletion yeast strains
GSE28098 Histone H4 acetylation in wild-type, ASF1, SET2 and ASF1 SET2 deletion yeast strains
GSE28099 Co-transcriptional histone acetylation is a consequence of histone exchange
GSE32002 Replication Timing in Yeast: CGH microarrays: S vs G1 cells in various stress conditions
GSE32042 Isw1 and Chd1 maintain chromatin organization during transcription
GSE32071 Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange
GSE32416 Sub1 and RPA associate with RNA Polymerase II at different stages of transcription
GSE37039 Histone H3 K56 acetylation in wild-type histone shuffle strain (YBL574)
GSE37105 Histone H3 K36 trimethylation in wild-type BY4741 yeast strains
GSE39080 Systematic dissection of roles for chromatin regulators in a yeast stress response
GSE52696 Molecular Specificity, Convergence and Constraint Shape Adaptive Evolution in Nutrient-Poor Environments [aCGH]
GSE52787 Molecular Specificity, Convergence and Constraint Shape Adaptive Evolution in Nutrient-Poor Environments
GSE62519 The RSC Complex localizes to coding sequences to regulate Pol II and histone occupancy (Agilent)
GSE62522 The RSC Complex localizes to coding sequences to regulate Pol II and histone occupancy
GSE63517 Break-Seq and RNA-seq analysis of gene expression during and after exposure to hydroxyurea in WT and mec1 cells in Saccharomyces cerevisiae
GSE64446 Saccharomyces cerevisiae: DSB mapping by Break-chip in a two-color experiment (G1 control vs. S phase samples)
GSE69642 Spatial regulation of transcription and histone occupancy by histone chaperones FACT and Spt6
GSE77016 Recruitment of Saccharomyces cerevisiae Cmr1/Ydl156w to coding regions promotes transcription genome wide
GSE104671 Single stranded DNA formation during S phase in orc4Y232C yeast cells
GSE151849 Centromeric R loops contribute to defects in kinetochore assembly and chromosomal instability
GSE160507 The Asymmetric Distribution of RNAPII and Nucleosomes on Replicated Daughter Genomes is caused by Differences in Replication Timing between the Lagging and the Leading Strand [ChIP]
GSE160509 The Asymmetric Distribution of RNAPII and Nucleosomes on Replicated Daughter Genomes is caused by Differences in Replication Timing between the Lagging and the Leading Strand
GSE166733 Exceptional origin activation revealed by comparative analysis in two laboratory yeast strains
GSE205068 Ribosomal DNA replication time coordinates completion of genome replication and anaphase in yeast
Relations Alternative to
GPL4131
Data table header descriptions ID Agilent Probe name
CONTROL_TYPE GENE_SYMBOL Gene Symbol
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
GB_RANGE Accession.Version[start..end] (based on SGD October 2003 genome sequence)
SPOT_ID
Data table ID CONTROL_TYPE GENE_SYMBOL ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION GB_RANGE SPOT_ID A_75_P01000003
FALSE
YAL068C
sgd|YAL068C|sgd|YAL068C:2099
chr1:000000048-000000093
DOWNSTREAM
NC_001133.3[000000048..000000093]
A_75_P01000016
FALSE
YAL068C
sgd|YAL068C|sgd|YAL068C:1953
chr1:000000193-000000240
DOWNSTREAM
NC_001133.3[000000193..000000240]
A_75_P01000071
FALSE
YAL068C
sgd|YAL068C|sgd|YAL068C:1374|sgd|YAL067W-A:-1684
chr1:000000766-000000825
DOWNSTREAM
NC_001133.3[000000766..000000825]
A_75_P01000148
FALSE
YAL068C
sgd|YAL068C|sgd|YAL068C:626|sgd|YAL067W-A:-936
chr1:000001516-000001571
DOWNSTREAM
NC_001133.3[000001516..000001571]
A_75_P01000219
FALSE
YAL068C-YAL067W-A
sgd|YAL068C|sgd|YAL067W-A|sgd|YAL068C:-147|sgd|YAL067W-A:-163
chr1:000002287-000002346
DIVERGENT_PROMOTER
NC_001133.3[000002287..000002346]
A_75_P01000274
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:384|sgd|YAL068C:-694
chr1:000002834-000002893
DOWNSTREAM
NC_001133.3[000002834..000002893]
A_75_P01000289
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:547|sgd|YAL068C:-857
chr1:000002997-000003056
DOWNSTREAM
NC_001133.3[000002997..000003056]
A_75_P01000310
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:744|sgd|YAL068C:-1054
chr1:000003194-000003253
DOWNSTREAM
NC_001133.3[000003194..000003253]
A_75_P01000338
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1055|sgd|YAL068C:-1365
chr1:000003505-000003564
DOWNSTREAM
NC_001133.3[000003505..000003564]
A_75_P01000360
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1286|sgd|YAL068C:-1596
chr1:000003736-000003795
DOWNSTREAM
NC_001133.3[000003736..000003795]
A_75_P01000376
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1441|sgd|YAL068C:-1751
chr1:000003891-000003950
DOWNSTREAM
NC_001133.3[000003891..000003950]
A_75_P01000394
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1625|sgd|YAL068C:-1935
chr1:000004075-000004134
DOWNSTREAM
NC_001133.3[000004075..000004134]
A_75_P01000410
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1779
chr1:000004229-000004287
DOWNSTREAM
NC_001133.3[000004229..000004287]
A_75_P01000426
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:1922
chr1:000004372-000004431
DOWNSTREAM
NC_001133.3[000004372..000004431]
A_75_P01000446
FALSE
YAL067W-A
sgd|YAL067W-A|sgd|YAL067W-A:2130
chr1:000004580-000004639
DOWNSTREAM
NC_001133.3[000004580..000004639]
A_75_P01000473
FALSE
sgd|YAL067W-A:2407
chr1:000004857-000004916
Unknown
NC_001133.3[000004857..000004916]
A_75_P01000507
FALSE
sgd|YAL067W-A:2719
chr1:000005169-000005227
Unknown
NC_001133.3[000005169..000005227]
A_75_P01000523
FALSE
SEO1
sgd|YAL067C|sgd|SEO1:3639
chr1:000005349-000005408
DOWNSTREAM
NC_001133.3[000005349..000005408]
A_75_P01000549
FALSE
SEO1
sgd|YAL067C|sgd|SEO1:3362
chr1:000005626-000005685
DOWNSTREAM
NC_001133.3[000005626..000005685]
A_75_P01000563
FALSE
SEO1
sgd|YAL067C|sgd|SEO1:3225
chr1:000005763-000005821
DOWNSTREAM
NC_001133.3[000005763..000005821]
43504 5418 Kbytes .Supplementary data files not provided
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