NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL10986 Query DataSets for GPL10986
Status Public on Dec 11, 2010
Title Agilent-020127 Lactobacillus reuteri 100-23 Agilent 4x44k format
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Limosilactobacillus reuteri subsp. rodentium
Manufacturer Agilent
Manufacture protocol Chemical In-situ oligonucleotide synthesis.
Support glass
Coating unknown
 
 
Contributor(s) Wilson CM, Tannock GW, O'Toole PW
Submission date Sep 27, 2010
Last update date Dec 11, 2010
Contact name Charlotte Wilson
Organization name ORNL
Department Biosciences Bldg 1520
Lab 329
Street address 1 Bethel Valley Road
City Oak Ridge
State/province Tennessee
ZIP/Postal code 37831-6342
Country New Zealand
 
Samples (18) GSM602782, GSM602783, GSM602784, GSM602785, GSM805411, GSM805412 
Series (3)
GSE24472 Maltose utilization by Lactobacillus reuteri 100-23
GSE32520 Transcriptional and metabolomic consequences of luxS inactivation reveal a metabolic rather than quorum sensing role for LuxS in Lactobacillus reuteri 100-23
GSE36286 Inactivation of the Lactobacillus reuteri 100-23 ureC gene affects in vitro acid tolerance, and impairs ecological fitness in vivo

Data table header descriptions
ID Feature Number
SEQUENCE Probe sequence
ControlType
ProbeName
ORF locus tag
SystematicName
SPOT_ID

Data table
ID SEQUENCE ControlType ProbeName ORF SystematicName SPOT_ID
1 1 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
2 1 DarkCorner DarkCorner --DarkCorner
3 1 DarkCorner DarkCorner --DarkCorner
4 1 DarkCorner DarkCorner --DarkCorner
5 1 DarkCorner DarkCorner --DarkCorner
6 1 DarkCorner DarkCorner --DarkCorner
7 1 DarkCorner DarkCorner --DarkCorner
8 1 DarkCorner DarkCorner --DarkCorner
9 1 DarkCorner DarkCorner --DarkCorner
10 1 DarkCorner DarkCorner --DarkCorner
11 1 DarkCorner DarkCorner --DarkCorner
12 TAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAGGTGTTG 0 2500070851_01A 0 2500070851_01A
13 GGTCGGTAGTTGGGATGGGGAATAATCGCAACAAAATTGATCATTCTAAACGGGAACTTT 0 2500069093_01C Lreu23DRAFT_3090 Lreu23DRAFT_3090
14 TGGTTTTTATGAAGAATACACGGGGCAATTAAAACGAATTGATCACCATGCTCACCACCT 0 2500069712C Lreu23DRAFT_4166 Lreu23DRAFT_4166
15 GTTCAGTTAGCGACGCAATTAACGAGAAAGCTGGTCGCCTTTTGACAATTGAGTATCAAT 0 2500070725C Lreu23DRAFT_5069 Lreu23DRAFT_5069
16 TGAGCGCGAAAATGACTTAAATGATAATGAAGTTGCTTTCGGCAGTCATTTATCTGTTGA 0 2500070361_01A Lreu23DRAFT_4747 Lreu23DRAFT_4747
17 TCGCTCAATTATTAAAATCACTGACTTTCAAACCTTGCAACAGATTGTGGAAACGGAGGA 0 CUST_1775_PI381678527 Lreu23DRAFT_4554 Lreu23DRAFT_4554
18 GTGGCTTTTTGCCTAATGACCAACGTAATCTAGCATACCAAGCAGCTCATATTTTACGCA 0 2500070740A Lreu23DRAFT_5084 Lreu23DRAFT_5084
19 TTCCGGCCACAAGTATGGTTTAGTTTATCCTGGTATTGGTTGGGTATTATGGCGTGATAA 0 2500071325_01B Lreu23DRAFT_3554 Lreu23DRAFT_3554
20 AAGAGATCAACCACTACTGTATTGCTTCAACGAATGGCAAAGAAAAATTTGATTGAACGT 0 2500069429_01B Lreu23DRAFT_3404 Lreu23DRAFT_3404

Total number of rows: 45220

Table truncated, full table size 5060 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap