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Platform GPL14186 Query DataSets for GPL14186
Status Public on Aug 23, 2011
Title Illumina HumanRef-8 v2 Expression Beadchip 1699538181
Technology type oligonucleotide beads
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Illumina Inc.
Manufacture protocol see manufacturer's website
 
Description Researchers can generate whole genome expression profiles for multiple samples on a single BeadChip. Researchers can profile six or eight samples perBeadChip, with more than 22,000 transcript probes using the HumanRef-8 v2 beadchip.

Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. These should be submitted as part of a GEOarchive. Instructions for assembling a GEOarchive may be found at http://www.ncbi.nlm.nih.gov/projects/geo/info/spreadsheet.html
 
Submission date Aug 24, 2011
Last update date Jan 18, 2013
Contact name Sherry Wang
E-mail(s) bchdm@nus.edu.sg
Organization name National University of Singapore
Department Biochemistry
Street address 21 Lower Kent Ridge Road
City Singapore
ZIP/Postal code 119077
Country Singapore
 
Samples (34) GSM770630, GSM770631, GSM770632, GSM770633, GSM1244995, GSM1244996 
Series (3)
GSE24993 Expression Profiling of Tissues versus Primary Cultures from Colorectal Cancer Patients
GSE51411 ST3GAL1-Associated Transcriptomic Program in Glioblastoma Tumor Growth, Invasion, and Prognosis
GSE51413 ST3GAL1-Associated Transcriptomic Program in Glioblastoma Tumor Growth, Invasion, and Prognosis

Data table header descriptions
ID PROBE_ID
Array_Address_Id Decoder id
GB_ACC GenBank Accession number
SEQUENCE Probe sequence
SYMBOL Gene symbol from the source database

Data table
ID Array_Address_Id GB_ACC SEQUENCE SYMBOL
ILMN_1809034 20605 NM_176818.1 GAATTACTACAAAACTCCCATCGCGTCGTGGAGGAGTACTTTGTGGCCCC 15E1.2
ILMN_1660305 3450747 NM_177966.4 AGCCCACTCCCTTCAAGAAAAGCTTTGATTTTCCCCAGTCATGAAAGCCC 2'-PDE
ILMN_1792173 3060450 NM_014444.2 GCACCTACTACGTACCTTGGTACTGTTCAAGCTGTGGGAGATACAGCGGT 76P
ILMN_1762337 870131 NM_182762.2 GTGTTACAAGACCTTCAGTCAGCTTTGGACAGAATGAAAAACCCTGTGAC 7A5
ILMN_1736007 5310368 NM_130786.2 GCAGAGCTGGACGCTGTGGAAATGGCTGGATTCCTCTGTGTTCTTTCCCA A1BG
ILMN_1787689 770300 NM_018723.2 CTCCAGCTTATGGTGAGTGTGGCTGGGGGTGCAGAGAGCGCACGGGAATT A2BP1
ILMN_1731507 3290546 NM_145893.1 AAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCTCTG A2BP1
ILMN_1814316 3420601 NM_145891.1 CAGTGACAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCAC A2BP1
ILMN_1745607 7400044 NM_000014.4 CTTGGAAATGCTTGAAGACCACAAGGCTGAAAAGTGCTTTGCTGGAGTCC A2M
ILMN_1757454 2100711 NM_144670.2 GGGGGCTCTCCAGAGAGGAGACGGTGGTAGAGGGTGAACTAGAGAAGATA A2ML1
ILMN_1735045 5670674 NM_017436.4 TCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCG A4GALT
ILMN_1680754 4590047 NM_016161.1 CCACATGAACCAGGAGGGGCGGGCTGTGATTAGAGGAAGCAACACACTGG A4GNT
ILMN_1659452 990129 NM_207290.1 CGCAGGGAGACAGTTCAGTCACTGCAATCTTCATGCCCATCAGTTTCTTG AAA1
ILMN_1767388 1410601 NM_207285.1 GACCTGGACGCCTCAACACTCCTGGCCTTACCTCCCTTGCTGAACGTCTC AAA1
ILMN_1673870 3520681 NM_207283.1 CACCTTCTTTGTTGGGATGTTCTCTGGACTAATGACTCCAGGCGAGACCA AAA1
ILMN_1675204 4590451 NM_207289.1 GTAGACCATTTTCATGTGTATACCTCCTCTGAGTCACCCTCAGGTAGGGA AAA1
ILMN_1755321 870088 NM_015665.4 CATGACCTGCCCCTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGA AAAS
ILMN_1698554 1110619 NM_023928.3 GTGCTGCCTCCACCTGAGAGTTGCTAGGGGGTTCTTGTCGAGATCATGTC AACS
ILMN_1805938 580711 NM_001086.2 CACCCGACTTCGCAACACTGGGGTTCAGGTGACTCATAACCATGTTGAGG AADAC
ILMN_1676336 5080431 NM_020792.3 GGCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAAGCCT AADACL1

Total number of rows: 22184

Table truncated, full table size 1966 Kbytes.




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