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| Status |
Public on Dec 20, 2011 |
| Title |
JCVI PFGRC Enterococcus faecalis 14K v1 array (condensed) |
| Technology type |
spotted oligonucleotide |
| Distribution |
non-commercial |
| Organism |
Enterococcus faecalis |
| Manufacturer |
JCVI PFGRC |
| Manufacture protocol |
QEF, with arrayer AUSHON, machine cycles 0, pen id 0, pen cycles 0, operator 0, humidity control 0, humidity set point0.000
|
| Coating |
aminosilane |
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| Web link |
http://pfgrc.jcvi.org/index.php/microarray/array_description/enterococcus_faecalis/version1.html
|
| Submission date |
Dec 19, 2011 |
| Last update date |
May 25, 2012 |
| Contact name |
Jessica K Kajfasz |
| E-mail(s) |
jkajfasz@dental.ufl.edu
|
| Organization name |
University of Florida
|
| Department |
Oral Biology
|
| Lab |
Lemos-Abranches
|
| Street address |
1395 Center Drive
|
| City |
Gainesville |
| State/province |
FL |
| ZIP/Postal code |
32610 |
| Country |
USA |
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| Samples (88)
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GSM851043, GSM851044, GSM851045, GSM851046, GSM851047, GSM851048
GSM851049, GSM851050, GSM851051, GSM851052, GSM851053, GSM851054, GSM851055, GSM851056, GSM851057, GSM851058, GSM851059, GSM851060, GSM851061, GSM851062, GSM851063, GSM851064, GSM851065, GSM851066, GSM851067, GSM851068, GSM851069, GSM851070, GSM851071, GSM851072, GSM851073, GSM851074, GSM851075, GSM851076, GSM851077, GSM851078, GSM851079, GSM851080, GSM851081, GSM851082, GSM851083, GSM851084, GSM851085, GSM851086, GSM851087, GSM851088, GSM851089, GSM851090, GSM1099506, GSM1099507, GSM1099508, GSM1099509, GSM1099510, GSM1099511, GSM1099512, GSM1099513, GSM1099514, GSM1099515, GSM1099516, GSM1099517, GSM1099518, GSM1099519, GSM1099520, GSM1099521, GSM1099522, GSM1099523, GSM1099524, GSM1099525, GSM1099526, GSM1099527, GSM1099528, GSM1099529, GSM1099530, GSM1099531, GSM1099532, GSM1099533, GSM1101775, GSM1101776, GSM1101777, GSM1101778, GSM1101779, GSM1101780, GSM1101781, GSM1101782, GSM1101783, GSM1101784, GSM1101785, GSM1101786
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| Series (4)
|
| GSE34561 |
Enterococcus faecalis OG1RF vs. Δrel mutants under control or mupirocin-treated conditions |
| GSE45231 |
Enterococcus faecalis OG1RF control vs. treatment with ampicillin, bacitracin, or cephalothin |
| GSE45300 |
Enterococcus faecalis OG1RF control vs. treatment with vancomycin |
| GSE45306 |
Enterococcus faecalis OG1RF control vs. treatment with ampicillin, bacitracin, cephalothin, or vancomycin |
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| Relations |
| Affiliated with |
GPL10203 |
| Data table header descriptions |
| ID |
Primary Target; Locus primarily hit by the oligo |
| Common Name of Primary Target |
Common name of primary target |
| Gene Symbol |
Gene symbol |
| ORF |
Gene symbol |
| SPOT_ID |
|
| Data table |
| ID |
Common Name of Primary Target |
Gene Symbol |
ORF |
SPOT_ID |
| HMPREF0345_0001 |
cell wall surface anchor family protein |
|
|
HMPREF0345_0001 |
| HMPREF0345_0002 |
conserved hypothetical protein |
|
|
HMPREF0345_0002 |
| HMPREF0345_0003 |
conserved hypothetical protein |
|
|
HMPREF0345_0003 |
| HMPREF0345_0004 |
conserved hypothetical protein |
|
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HMPREF0345_0004 |
| HMPREF0345_0005 |
hypothetical protein |
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HMPREF0345_0005 |
| HMPREF0345_0006 |
glucan binding protein C |
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HMPREF0345_0006 |
| HMPREF0345_0007 |
replication initiation protein |
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HMPREF0345_0007 |
| HMPREF0345_0008 |
FtsK/SpoIIIE family protein |
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HMPREF0345_0008 |
| HMPREF0345_0009 |
hypothetical protein |
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HMPREF0345_0009 |
| HMPREF0345_0010 |
hypothetical protein |
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HMPREF0345_0010 |
| HMPREF0345_0011 |
hypothetical protein |
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HMPREF0345_0011 |
| HMPREF0345_0012 |
hypothetical protein |
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HMPREF0345_0012 |
| HMPREF0345_0013 |
conserved hypothetical protein |
|
|
HMPREF0345_0013 |
| HMPREF0345_0014 |
hypothetical protein |
|
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HMPREF0345_0014 |
| HMPREF0345_0015 |
PcfW family protein |
pcfW-2 |
pcfW-2 |
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| HMPREF0345_0016 |
hypothetical protein |
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HMPREF0345_0016 |
| HMPREF0345_0017 |
hypothetical protein |
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HMPREF0345_0017 |
| HMPREF0345_0018 |
possible UvrC family protein |
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HMPREF0345_0018 |
| HMPREF0345_0019 |
cobyrinic acid a,c-diamide synthase |
repB |
repB |
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| HMPREF0345_0020 |
conserved hypothetical protein |
|
|
HMPREF0345_0020 |
Total number of rows: 5274
Table truncated, full table size 334 Kbytes.
| Supplementary data files not provided |
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