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Platform GPL15678 Query DataSets for GPL15678
Status Public on Jun 09, 2012
Title Agilent-027139 Nofima Atlantic salmon microarray version 4
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Salmo salar
Manufacturer Agilent Technologies
Manufacture protocol See SurePrint Technology at manufacturer's web site (www.agilent.com).
Support glass
 
Description GE 4x44k oligo microarray that covers 21 k unique transcripts of Atlantic salmon. Oligonucleotides, 60-mer plus a linker, are synthesized directly on a glass slide using the Agilent's SurePrint Technology; oligo design was carried out by eArray.
 
Submission date Jun 08, 2012
Last update date Jun 09, 2012
Contact name Aleksei Krasnov
E-mail(s) aleksei.krasnov@nofima.no
Phone +47 97602165
Organization name Nofima AS
Department Fish Health
Street address Osloveien 1
City Aas
ZIP/Postal code 1430
Country Norway
 
Samples (31) GSM945970, GSM945971, GSM945972, GSM945973, GSM945974, GSM945975 
Series (2)
GSE38603 Exercise training effects on disease resistance are dependent on training regimes and inherent swimming performance in Atlantic salmon
GSE126993 CpGs induce differentiation of Atlantic salmon mononuclear phagocytes into cells with dendritic morphology and a proinflammatory transcriptional profile but an exhausted allostimulatory activity

Data table header descriptions
ID Column-Row
Column Feature location:column
Row Feature location: row
GB_ACC GenBank or RefSeq accession
Accession Accession (GenBank, Unigene or TGI)
Clone Identifier
Seq_ID Custom name assigned by producer
SPOT_ID
SEQUENCE Sequence of oligonucleotide

Data table
ID Column Row GB_ACC Accession Clone Seq_ID SPOT_ID SEQUENCE
1-1 1 1 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
1-2 1 2 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
1-3 1 3 GE_BrightCorner GE_BrightCorner --GE_BrightCorner
1-4 1 4 DarkCorner DarkCorner --DarkCorner
1-5 1 5 DarkCorner DarkCorner --DarkCorner
1-6 1 6 DarkCorner DarkCorner --DarkCorner
1-7 1 7 DarkCorner DarkCorner --DarkCorner
1-8 1 8 DarkCorner DarkCorner --DarkCorner
1-9 1 9 DarkCorner DarkCorner --DarkCorner
1-10 1 10 DarkCorner DarkCorner --DarkCorner
1-11 1 11 DarkCorner DarkCorner --DarkCorner
1-12 1 12 DarkCorner DarkCorner --DarkCorner
1-13 1 13 DarkCorner DarkCorner --DarkCorner
1-14 1 14 DarkCorner DarkCorner --DarkCorner
1-15 1 15 DarkCorner DarkCorner --DarkCorner
1-16 1 16 DarkCorner DarkCorner --DarkCorner
1-17 1 17 DarkCorner DarkCorner --DarkCorner
1-18 1 18 DarkCorner DarkCorner --DarkCorner
1-19 1 19 DarkCorner DarkCorner --DarkCorner
1-20 1 20 DarkCorner DarkCorner --DarkCorner

Total number of rows: 45220

Table truncated, full table size 5727 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15678_027139_D_20100131.gal.gz 2.4 Mb (ftp)(http) GAL

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