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Platform GPL19387 Query DataSets for GPL19387
Status Public on Nov 05, 2014
Title Agilent-021850 SurePrint G3 Human CGH Microarray (Probe Name version)
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL9777.
 
Submission date Nov 05, 2014
Last update date Nov 05, 2014
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (286) GSM533189, GSM533190, GSM533191, GSM533192, GSM533193, GSM533194 
Series (24)
GSE19000 Comparative genomic hybridization of 20 patients with S├ęzary syndrome
GSE21731 Genomic loss of the putative tumor suppressor gene E2A promotes cutaneous T-cell lymphoma in human
GSE63013 The long isoform of RUNX3 acts as a tumor supressor in human T-cell lymphoma
Relations
Alternative to GPL9777

Data table header descriptions
ID Agilent feature number
CONTROL_TYPE Control type
GB_ACC GenBank Accession number
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
SPOT_ID Spot identifier

Data table
ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION SPOT_ID
HsCGHBrightCorner pos HsCGHBrightCorner
DarkCorner pos DarkCorner
A_16_P17991140 FALSE NM_012301 MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 ref|NM_012301 chr7:77827408-77827467 hs|q21.11 Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 2 (MAGI2), mRNA. A_16_P17991140
A_16_P33811607 FALSE NM_207112 HAGHL hydroxyacylglutathione hydrolase-like ref|NM_207112|ref|NM_032304 chr16:718810-718854 hs|p13.3 Homo sapiens hydroxyacylglutathione hydrolase-like (HAGHL), transcript variant 1, mRNA. A_16_P33811607
A_16_P21504511 FALSE chrX:80682974-80683033 hs|q21.1 A_16_P21504511
A_16_P35765557 FALSE chr2:88227682-88227738 hs|p11.2 A_16_P35765557
A_18_P22657524 FALSE NM_001135774 SYN3 synapsin III ref|NM_001135774 chr22:31775488-31775547 hs|q12.3 Homo sapiens synapsin III (SYN3), transcript variant IIIg, mRNA. A_18_P22657524
A_16_P16173769 FALSE NM_014483 RBMS3 RNA binding motif, single stranded interacting protein ref|NM_014483|ref|NM_001003792|ref|NM_001003793 chr3:29899030-29899089 hs|p24.1 Homo sapiens RNA binding motif, single stranded interacting protein (RBMS3), transcript variant 2, mRNA. A_16_P16173769
A_16_P20508688 FALSE chr16:68351412-68351471 hs|q22.1 A_16_P20508688
A_16_P17090144 FALSE NM_015384 NIPBL Nipped-B homolog (Drosophila) ref|NM_015384|ref|NM_133433 chr5:36969564-36969623 hs|p13.2 Homo sapiens Nipped-B homolog (Drosophila) (NIPBL), transcript variant B, mRNA. A_16_P17090144
A_16_P20531565 FALSE NM_016373 WWOX WW domain containing oxidoreductase ref|NM_016373 chr16:77655632-77655691 hs|q23.1 Homo sapiens WW domain containing oxidoreductase (WWOX), transcript variant 1, mRNA. A_16_P20531565
A_16_P38660011 FALSE NM_173550 C9orf93 chromosome 9 open reading frame 93 ref|NM_173550 chr9:15605655-15605714 hs|p22.3 Homo sapiens chromosome 9 open reading frame 93 (C9orf93), mRNA. A_16_P38660011
A_18_P13399885 FALSE chr2:132055046-132055105 hs|q21.1 A_18_P13399885
A_18_P10796304 FALSE NR_026592 BMS1P4 BMS1 pseudogene 4 ref|NR_026592 chr10:75153837-75153889 hs|q22.2 Homo sapiens BMS1 pseudogene 4 (BMS1P4), non-coding RNA. A_18_P10796304
A_16_P03203060 FALSE chr17:2617550-2617609 hs|p13.3 A_16_P03203060
A_16_P03779402 FALSE chrX:137510102-137510161 hs|q26.3 A_16_P03779402
A_14_P137194 FALSE NR_026935 LOC158696 hypothetical LOC158696 ref|NR_026935 chrX:137525298-137525357 hs|q26.3 Homo sapiens hypothetical LOC158696 (LOC158696), non-coding RNA. A_14_P137194
A_18_P14055431 FALSE NM_000844 GRM7 glutamate receptor, metabotropic 7 ref|NM_000844|ref|NM_181874 chr3:7130923-7130982 hs|p26.1 Homo sapiens glutamate receptor, metabotropic 7 (GRM7), transcript variant 1, mRNA. A_18_P14055431
A_16_P15776094 FALSE AK056906 gb|AK056906 chr2:108317426-108317485 hs|q12.3 Homo sapiens cDNA FLJ32344 fis, clone PROST2006450, moderately similar to N-HYDROXYARYLAMINE SULFOTRANSFERASE (EC 2.8.2.-). A_16_P15776094
A_16_P20147195 FALSE chr14:94287480-94287534 hs|q32.13 A_16_P20147195

Total number of rows: 413786

Table truncated, full table size 65856 Kbytes.




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