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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 14, 2014 |
| Title |
Illumina NextSeq 500 (Homo sapiens; Mus musculus) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organisms |
Homo sapiens; Mus musculus |
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| Submission date |
Nov 14, 2014 |
| Last update date |
Feb 27, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1663)
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GSM1544798, GSM1544799, GSM1629192, GSM1717523, GSM1717524, GSM1717525
GSM1717526, GSM1717527, GSM1717528, GSM1717529, GSM1717530, GSM1717531, GSM1717532, GSM1717533, GSM1717534, GSM1717535, GSM1717536, GSM1717537, GSM1717538, GSM1717539, GSM1717540, GSM1717541, GSM1717542, GSM1717543, GSM1717544, GSM1717545, GSM1717546, GSM1717547, GSM1717548, GSM1717549, GSM1717550, GSM1717551, GSM1717552, GSM1717553, GSM1717554, GSM1717555, GSM1717556, GSM1717557, GSM1717558, GSM1717559, GSM1717560, GSM1717561, GSM1717562, GSM1717563, GSM1717564, GSM1717565, GSM1717566, GSM1717567, GSM1717568, GSM1717569, GSM1717570, GSM1717571, GSM1717572, GSM1717573, GSM1717574, GSM1717575, GSM1717576, GSM1717577, GSM1717578, GSM1717579, GSM1717580, GSM1717581, GSM1717582, GSM1717583, GSM1717584, GSM1717585, GSM1717586, GSM1717587, GSM1717588, GSM1717589, GSM1717590, GSM1717591, GSM1717592, GSM1717593, GSM1717594, GSM1717595, GSM1717596, GSM1717597, GSM1717598, GSM1717599, GSM1717600, GSM1717601, GSM1717602, GSM1717603, GSM1717604, GSM1717605, GSM1717606, GSM1717607, GSM1717608, GSM1717609, GSM1717610, GSM1717611, GSM1717612, GSM1717613, GSM1717614, GSM1717615, GSM1717616, GSM1717617, GSM1717618, GSM1717619, GSM1717620, GSM1717621, GSM1717622, GSM1717623, GSM1717624, GSM1717625, GSM1717626, GSM1717627, GSM1717628, GSM1717629, GSM1717630, GSM1717631, GSM1717632, GSM1717633, GSM1717634, GSM1717635, GSM1717636, GSM1717637, GSM1717638, GSM1717639, GSM1717640, GSM1717641, GSM1717642, GSM1717643, GSM1717644, GSM1717645, GSM1717646, GSM1717647, GSM1717648, GSM1717649, GSM1717650, GSM1717651, GSM1717652, GSM1717653, GSM1717654, GSM1717655, GSM1717656, GSM1717657, GSM1717658, GSM1717659, GSM1717660, GSM1717661, GSM1717662, GSM1717663, GSM1717664, GSM1717665, GSM1717666, GSM1717667, GSM1717668, GSM1717669, GSM1717670, GSM1717671, GSM1717672, GSM1717673, GSM1717674, GSM1717675, GSM1717676, GSM1717677, GSM1717678, GSM1717679, GSM1717680, GSM1717681, GSM1717682, GSM1717683, GSM1717684, GSM1717685, GSM1717686, GSM1717687, GSM1717688, GSM1717689, GSM1717690, GSM1717691, GSM1717692, GSM1717693, GSM1717694, GSM1717695, GSM1717696, GSM1717697, GSM1717698, GSM1717699, GSM1717700, GSM1717701, GSM1717702, GSM1717703, GSM1717704, GSM1717705, GSM1717706, GSM1717707, GSM1717708, GSM1717709, GSM1717710, GSM1717711, GSM1717712, GSM1717713, GSM1717714, GSM2176650, GSM2176651, GSM2176652, GSM2176653, GSM2176654, GSM2176655, GSM2176656, GSM2176657, GSM2176658, GSM2176659, GSM2176660, GSM2176661, GSM2227411, GSM2227412, GSM2227413, GSM2227414, GSM2227415, GSM2227416, GSM2227417, GSM2227418, GSM2227419, GSM2227420, GSM2227421, GSM2227422, GSM2227423, GSM2232662, GSM2232663, GSM2277952, GSM2345411, GSM2345412, GSM2345413, GSM2359902, GSM2359903, GSM2359904, GSM2359905, GSM2486329, GSM2486330, GSM2486335, GSM2599699, GSM2599700, GSM2599703, GSM2599704, GSM2743164, GSM2743165, GSM2801860, GSM2801861, GSM2801862, GSM2801863, GSM2801864, GSM2801865, GSM2801866, GSM2801867, GSM2801868, GSM2801869, GSM2801870, GSM2801871, GSM2801872, GSM2801873, GSM2801874, GSM2801875, GSM2801876, GSM2801877, GSM2801878, GSM2801879, GSM2801880, GSM2801881, GSM2801882, GSM2801883, GSM2801884, GSM2801885, GSM2801886, GSM2801887, GSM2801888, GSM2801889, GSM2801890, GSM2801891, GSM2801892, GSM2801893, GSM2801894, GSM2801895, GSM2801896, GSM2801897, GSM2801898, GSM2801899, GSM2801900, GSM2801901, GSM2801902, GSM2801903, GSM2801904, GSM2801905, GSM2801906, GSM2801907, GSM2801908, GSM2801909, GSM2801910, GSM2801911, GSM2801912, GSM2801913, GSM2801914, GSM2801915, GSM2801916, GSM2801917, GSM2801918, GSM2801919, GSM2801920, GSM2801921, GSM2801922, GSM2801923, GSM2801924, GSM2801925, GSM2801926, GSM2801927, GSM2801928, GSM2801929, GSM2801930, GSM2801931, GSM2801932, GSM2801933, GSM2801934, GSM2801935, GSM2801936, GSM2801937, GSM2801938, GSM2801939, GSM2801940, GSM2801941, GSM2801942, GSM2801943, GSM2801944, GSM2801945, GSM2801946, GSM2801947, GSM2801948, GSM2801949, GSM2801950, GSM2801951, GSM2801952, GSM2801953, GSM2801954, GSM2801955, GSM2801956, GSM2801957, GSM2801958, GSM2801959, GSM2801960, GSM2801961, GSM2801962, GSM2801963, GSM2801964, GSM2801965, GSM2801966, GSM2801967, GSM2801968, GSM2801969, GSM2801970, GSM2801971, GSM2801972, GSM2801973, GSM2801974, GSM2801975, GSM2801976, GSM2801977, GSM2801978, GSM2801979, GSM2801980, GSM2801981, GSM2801982, GSM2801983, GSM2801984, GSM2801985, GSM2801986, GSM2801987, GSM2801988, GSM2801989, GSM2801990, GSM2801991, GSM2801992, GSM2801993, GSM2801994, GSM2801995, GSM2801996, GSM2801997, GSM2801998, GSM2801999, GSM2802000, GSM2802001, GSM2802002, GSM2802003, GSM2802004, GSM2802005, GSM2802006, GSM2802007, GSM2802008, GSM2802009, GSM2802010, GSM2802011, GSM2802012, GSM2802013, GSM2802014, GSM2802015, GSM2802016, GSM2802017, GSM2802018, GSM2802019, GSM2802020, GSM2802021, GSM2802022, GSM2802023, GSM2802024, GSM2802025, GSM2802026, GSM2802027, GSM2802028, GSM2802029, GSM2802030, GSM2802031, GSM2802032, GSM2802033, GSM2802034, GSM2802035, GSM2802036, GSM2802037, GSM2802038, GSM2802039, GSM2802040, GSM2802041, GSM2802042, GSM2802043, GSM2802044, GSM2802045, GSM2802046, GSM2802047, GSM2802048, GSM2802049, GSM2802050, GSM2802051, GSM2802052, GSM2802053, GSM2802054, GSM2802055, GSM2802056, GSM2802057, GSM2802058, GSM2802059, GSM2802060, GSM2802061, GSM2802062, GSM2802063, GSM2802064, GSM2802065, GSM2802066, GSM2802067, GSM2802068, GSM2802069, GSM2802070, GSM2802071, GSM2802072, GSM2802073, GSM2802074, GSM2802075, GSM2802076, GSM2802077, GSM2802078, GSM2802079, GSM2802080, GSM2802081, GSM2802082, GSM2802083, GSM2802084, GSM2802085, GSM2802086, GSM2802087, GSM2802088, GSM2802089, GSM2802090, GSM2802091, GSM2802092, GSM2802093, GSM2802094, GSM2802095, GSM2802096, GSM2802097, GSM2802098, GSM2802099, GSM2802100, GSM2802101, GSM2802102, GSM2802103, GSM2802104, GSM2802105, GSM2802106, GSM2802107, GSM2802108, GSM2802109, GSM2802110, GSM2802111, GSM2802112, GSM2802113, GSM2802114, GSM2802115, GSM2802116, GSM2802117, GSM2802118, GSM2802119, GSM2802120...
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| Series (97)
|
| GSE63269 |
Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 50 cells per microliter |
| GSE63473 |
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets |
| GSE66693 |
Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 12.5 cells per microliter |
| GSE70151 |
C1 analysis using mixtures of human (HEK) and mouse (3T3) cells |
| GSE81848 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Human/mouse mixing Drop-Seq experiments for K562 and MEFs |
| GSE81884 |
Multiplexed engineering and analysis of endogenous enhancer activity in single cells |
| GSE84114 |
Profiling in vivo Bone Lesion and ex vivo Bone-In-Culture Array Samples by Next-Generation Sequencing |
| GSE84353 |
Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs [CAP-Seq] |
| GSE84355 |
Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs |
| GSE85575 |
An automatec microwell platform for large-scale single cell RNA-seq. |
| GSE88773 |
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program |
| GSE89164 |
Cell fixation and preservation for droplet-based single cell transcriptomics |
| GSE92495 |
Seq-Well: A portable, low-cost platform for single-cell RNA-seq of low-input samples |
| GSE98561 |
Comprehensive single cell transcriptional profiling of a multicellular organism by combinatorial indexing |
| GSE102698 |
Colonic single-cell RNA-seq |
| GSE104493 |
Benchmark Data for scPLATE-Seq |
| GSE109761 |
Neutrophils Escort Circulating Tumor Cells to Enable Cell Cycle Progression |
| GSE110501 |
Single-cell transcriptome analyses reveal endothelial cell heterogeneity in tumors and changes following anti-angiogenic treatment |
| GSE111831 |
The transcriptomic profile of stem-cell derived neurons in 3D culture conditions and stem-cell derived astrocytic cells |
| GSE114044 |
Colonic single-cell RNA-seq experiment |
| GSE116011 |
An Optically Decodable Bead Array for Linking Imaging and Sequencing with Single-Cell Resolution |
| GSE117089 |
Joint profiling of chromatin accessibility and gene expression in thousands of single cells |
| GSE117309 |
High-throughput single-cell ChIP-seq identifies heterogeneity of chromatin states in breast cancer |
| GSE118312 |
Paracrine Ras/ERK signalling drives gene expression plasticity in a model of basal-like breast cancer |
| GSE118923 |
ATO treatment on mesenchymal stem cells (MSCs) interacting breast cancer cells |
| GSE119618 |
Synergy between variant PRC1 complexes defines Polycomb-mediated gene repression (ChIP-Seq) |
| GSE119620 |
Synergy between variant PRC1 complexes defines Polycomb-mediated gene repression |
| GSE120770 |
Selective Disruption of Core Regulatory Transcription [AQuA-HiChIP] |
| GSE120771 |
Selective Disruption of Core Regulatory Transcription |
| GSE121052 |
AP-1 is a temporally regulated dual gatekeeper of reprogramming to pluripotency (RNA-Seq) |
| GSE121053 |
AP-1 is a temporally regulated dual gatekeeper of reprogramming to pluripotency |
| GSE121119 |
Using a xenograft model and RNA-seq to differentiate between the tumour and tumour microenvironment transcriptome |
| GSE123392 |
MARS-seq2.0 an experimental and analytical pipeline for indexed sorting combined with Single-cell RNA sequencing |
| GSE124854 |
RNAseq based trascript profilling of MCF7-xenograft mice treated with one of three CDK4/6 inhibitiors |
| GSE125813 |
Human Naive Pluripotency Attained by Transient Inhibition of Mtor |
| GSE127117 |
Variant PRC2.1 and PRC2.2 co-operate to direct H3K27 methylations in ESCs [ChIP-seq] |
| GSE127121 |
Variant PRC2.1 and PRC2.2 co-operate to direct H3K27 methylations in ESCs |
| GSE127246 |
DMSO cryopreservation: the method of choice for droplet-based single-cell RNA sequencing of preserved cells [Drop-Seq] |
| GSE127249 |
DMSO cryopreservation: the method of choice for droplet-based single-cell RNA sequencing of preserved cells |
| GSE127257 |
Single cell ATAC-seq identifies broad changes in neuronal abundance and gene regulation in Down Syndrome |
| GSE130784 |
Ultra-High Throughput Single Cell Analysis of Proteins and RNAs by Split-pool Synthesis |
| GSE131351 |
Characterizing the temporal dynamics of gene expression in single cells with sci-fate |
| GSE133412 |
PRC2.1 and PRC2.2 synergize to co-ordinate H3K27 tri-methylation. |
| GSE134812 |
Single-cell epigenomics identifies a premetastatic regulatory program in lung adenocarcinoma [sciATAC-seq] |
| GSE137467 |
Investigating the effects on the tumour and tumour environment transcriptome, of inhibiting PKC in conjunction with Docetaxel treatment [RNA-seq] |
| GSE141851 |
Massively parallel and time-resolved RNA sequencing in single cells with scNT-Seq |
| GSE141861 |
Secondary Resistance to Anti-EGFR Therapy by Transcriptional Reprogramming in Patient-Derived Colorectal Cancer Models |
| GSE145194 |
Single-cell epigenomics identifies a premetastatic regulatory program in lung adenocarcinoma |
| GSE145550 |
Cas12a base editors induce efficient and specific editing with low DNA damage response (DNA targeted sequencing) |
| GSE145552 |
Cas12a base editors induce efficient and specific editing with low DNA damage response |
| GSE145830 |
Ileal single-cell analysis in the context of inflammation focused on tuft cells |
| GSE146042 |
WT colonic scRNA-seq experiment [re-analysis] |
| GSE148092 |
Low-input, deterministic profiling of single-cell transcriptomes reveals individual intestinal organoid subtypes comprised of single, dominant cell types [SPM] |
| GSE148093 |
Low-input, deterministic profiling of single-cell transcriptomes reveals individual intestinal organoid subtypes comprised of single, dominant cell types |
| GSE148448 |
Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells |
| GSE149496 |
mRNA-seq analysis of oral squamous cell carcinoma (OSCC) cell line OC3 and TW2.6 derived xenografts (CDXs) |
| GSE150226 |
Heterogeneity and chimerism of endothelial cells revealed by single cell transcriptome in orthotopic liver tumors |
| GSE150672 |
Highly Efficient, Massively-Parallel Single-Cell RNA-Seq Reveals Cellular States and Molecular Features of Human Skin Pathology |
| GSE151137 |
Integrating single-cell RNA-seq and imaging with SCOPE-seq2 |
| GSE157485 |
Single cell analysis of protein epitopes and chromatin accessibility using PHAGE-ATAC [Species_Mix_GFP] |
| GSE157486 |
Single cell analysis of protein epitopes and chromatin accessibility using PHAGE-ATAC |
| GSE159398 |
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency [ChIP-seq] |
| GSE159400 |
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency |
| GSE161422 |
Divergent resistance mechanisms to HER2-targeted therapies in breast cancer (scRNA-Seq) |
| GSE161423 |
Divergent resistance mechanisms to HER2-targeted therapies in breast cancer |
| GSE161993 |
BAP1 constrains pervasive H2AK119ub1 to control the transcriptional potential of the genome [ChIP-seq] |
| GSE161996 |
BAP1 constrains pervasive H2AK119ub1 to control the transcriptional potential of the genome. |
| GSE162798 |
Simple oligonucleotide-based multiplexing of single-cell chromatin accessibility |
| GSE165350 |
Exosome derived from liver humanized mice |
| GSE168762 |
Cross-Platform Validation of Neurotransmitter Release Impairments in Schizophrenia Patient-Derived NRXN1-Mutant Neurons |
| GSE171590 |
Profiling astrocyte transcriptional signatures in response to neurons and neuroactive compounds [RNA-seq] |
| GSE171595 |
Mapping Astrocyte Transcriptional Signatures in Response to Neuroactive Compounds |
| GSE174293 |
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq [Hs] |
| GSE178973 |
Moringa oleifera concentrate as a complementary treatment in triple negative breast cancer |
| GSE179115 |
Single-cell cloning of cancer cells secreting specific subsets of extracellular vesicles |
| GSE182833 |
Transcriptomic analysis of Nintedanib, Alpelisib and Nintedanib;Alpelisib treated bladder tumors |
| GSE185927 |
Distinct roles for CDK-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction (ChIP-Seq) |
| GSE185930 |
Distinct roles of CKM-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction |
| GSE186402 |
Decoding Expression Dynamics of Protein and Transcriptome at the Single Cell Level through Multi-Omics Sequencing in Paired Picoliter Chambers |
| GSE191249 |
Gene expression analysis of transplanted hiPSC-astrocyte progenitors generated from monozygotic twin pair discordant for schizophrenia into mouse brain |
| GSE191250 |
Contribution of astrocytes to familial risk and clinical manifestation of Schizophrenia |
| GSE195573 |
Microinjection of human mesenchymal stem cells to mouse blastocysts |
| GSE199346 |
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq |
| GSE199801 |
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq] |
| GSE199805 |
A CpG island-encoded mechanism protects genes from premature transcription termination |
| GSE203612 |
Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment |
| GSE208156 |
spinDrop: a modular droplet microfluidic platform to maximise single-cell RNA sequencing information content |
| GSE208710 |
Gene expression profile at single cell level of human cerebral organoid transplants harvested from the mouse brain. |
| GSE216636 |
Polycomb sustains promoters in a deep OFF-state by limiting PIC formation to counteract transcription |
| GSE218575 |
Transcriptomic analysis of Nintedanib, Alpelisib and Nintedanib;Alpelisib treated bladder tumors |
| GSE221027 |
Human PSEN1 Mutant Glia Improve Spatial Learning and Memory in Aged Mice |
| GSE224149 |
Scalable co-sequencing of RNA and DNA from individual nuclei |
| GSE225161 |
Pancreatic stellate and cancer cell transcriptomes from heterocellular, 3D invasive, cultures |
| GSE240101 |
Starving advanced prostate cancer cells by pharmacological gluose deprivation with a resveratrol trimer trans-Gnetin H [PDX] |
| GSE240104 |
Starving advanced prostate cancer cells by pharmacological gluose deprivation with a resveratrol trimer trans-Gnetin H |
| GSE245086 |
Topoisomerase I (TOP1) is a functional mitotic interactor of the bookmarking factor HNF1B [ChIPseq_786O] |
| GSE245087 |
Topoisomerase I (TOP1) is a functional mitotic interactor of the bookmarking factor HNF1B |
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| Supplementary data files not provided |
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