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Platform GPL19699 Query DataSets for GPL19699
Status Public on Jan 23, 2015
Title HumanOmniExpress-24 v1.0 BeadChip
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
 
 
Submission date Jan 23, 2015
Last update date Nov 23, 2015
Organization Illumina Inc.
E-mail(s) expression@illumina.com, techsupport@illumina.com
Phone 1 800 809 4566
URL http://www.illumina.com
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Samples (400) GSM1631396, GSM1631397, GSM1631398, GSM1631399, GSM1631400, GSM1631401 
Series (9)
GSE64582 SNP data from human fibroblasts and induced Pluripotent Stem cells from amyotrophic lateral sclerosis patients
GSE64584 Functional and pathological features of ALS in iPSC-derived motor neurons from patients with C9orf72 expansions
GSE66747 Copy number variation of human intestinal stem cells with different passage in culture (two pedigrees, passage 5, 10, 15 and 20)
Relations
Alternative to GPL21168 (SNP_ID version)

Data table header descriptions
ID
SNP_ID NCBI SNP accession
SPOT_ID
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo
Ploidy
Species
Source
SourceVersion
SourceStrand
SourceSeq
TopGenomicSeq
BeadSetID
Exp_Clusters
RefStrand

Data table
ID SNP_ID SPOT_ID IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo Ploidy Species Source SourceVersion SourceStrand SourceSeq TopGenomicSeq BeadSetID Exp_Clusters RefStrand
rs1000000-131_B_F_1894802339 rs1000000 BOT [T/C] 95775890 GACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG 37 12 126890980 diploid Homo sapiens dbSNP 131 BOT TCCCAGGGTTGACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG[T/C]TTATTTAAGGCTTAGTCGTTCATGGTCCCTAGGTGGCTGCCTCTGATTCAGGCACCATCA TGATGGTGCCTGAATCAGAGGCAGCCACCTAGGGACCATGAACGACTAAGCCTTAAATAA[A/G]CTAAAGAAGGCAGGAGAGGATGGAAAAAGACCTCCAGGAATTTCCAAGTCAACCCTGGGA 759 3 -
rs1000002-131_T_F_1889659641 rs1000002 TOP [A/G] 20798118 ACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA 37 3 183635768 diploid Homo sapiens dbSNP 131 TOP ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA 783 3 -
rs10000023-131_B_F_1908645866 rs10000023 BOT [T/G] 84656366 GAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT 37 4 95733906 diploid Homo sapiens dbSNP 131 BOT CTGGGAGGGGGAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT[T/G]GGGGGTTAGTTGGTTTTTGAAAGTGATTTTTTTGGTTTGTCATTAGAAATTGAAAGGATA TATCCTTTCAATTTCTAATGACAAACCAAAAAAATCACTTTCAAAAACCAACTAACCCCC[A/C]AATTCTAGCAATTCCACCTGTGAACTCTCTCTCCTGTCCATTCCGTGCTCCCCCTCCCAG 708 3 +
rs1000003-131_B_R_1891325219 rs1000003 BOT [T/C] 57645520 TGAATTTAATGCCTTAGTCCCAAGAAGAGAGAGGTGCTTTGAGTCAGTGC 37 3 98342907 diploid Homo sapiens dbSNP 131 TOP atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA 705 3 -
rs10000030-131_B_R_1891267789 rs10000030 BOT [T/C] 54698907 CTTTTTCCAAGCTATACAGATTCATAGATATTGGTATCTTTTCTTAAGCC 37 4 103374154 diploid Homo sapiens dbSNP 131 TOP TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC 705 3 -
rs10000037-131_B_R_1891342139 rs10000037 BOT [T/C] 67793954 AAATAGGTCAGCACGACTGTCATCTTTTCTTCTCGTTAATAACGTTTACA 37 4 38924330 diploid Homo sapiens dbSNP 131 TOP cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG 759 3 -
rs10000041-131_T_R_1893970874 rs10000041 TOP [A/C] 42786284 CGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC 37 4 165621955 diploid Homo sapiens dbSNP 131 BOT CCCTGCCCCAGCGCATCCCATGCACTCTGAAGGCCCTCTTGTCCTGCAGCCACGTAGCAC[T/G]GCACCCCCATTGCACCAGTTGCTGTTCACCTGTTCCCAGCTGCAATCCCGAGGGTTGCCT AGGCAACCCTCGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC[A/C]GTGCTACGTGGCTGCAGGACAAGAGGGCCTTCAGAGTGCATGGGATGCGCTGGGGCAGGG 772 3 -
rs10000042-131_T_R_1895028553 rs10000042 TOP [A/G] 65660910 TTGCCACATATTAAGACATTTCATCTTCACCAAAGCAGTAGGAGTGGCAC 37 4 5237152 diploid Homo sapiens dbSNP 131 BOT ggtaagttactcagccacactgtcctccatttcctcatgttggaaagagaatgacaatgg[T/C]gtgccactcctactgctttggtgaagatgaaatgtcttaatatgtggcaagcacttagac gtctaagtgcttgccacatattaagacatttcatcttcaccaaagcagtaggagtggcac[A/G]ccattgtcattctctttccaacatgaggaaatggaggacagtgtggctgagtaacttacc 708 3 -
rs10000049-131_T_F_1893954592 rs10000049 TOP [A/C] 88629420 TTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA 37 4 118948220 diploid Homo sapiens dbSNP 131 TOP AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA 759 3 +
rs1000007-131_T_F_1891267790 rs1000007 TOP [A/G] 52801922 CTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA 37 2 237752054 diploid Homo sapiens dbSNP 131 TOP GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT 705 3 -
rs10000073-131_T_R_1895048370 rs10000073 TOP [A/G] 50797532 CAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG 37 4 43022222 diploid Homo sapiens dbSNP 131 BOT TTACCTGAGGTAAGACTTACTAGATGGAAGAGTATGTGGCAGTAAGGAAAAATGTCTTCT[T/C]CTCTTTGGCATCCTAGTTGTACATTTACTCAGCTCCAAAGGGAAGAACTGTGCTCAGTAT ATACTGAGCACAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG[A/G]AGAAGACATTTTTCCTTACTGCCACATACTCTTCCATCTAGTAAGTCTTACCTCAGGTAA 705 3 -
rs10000081-131_B_F_1895064663 rs10000081 BOT [T/C] 39701599 TTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC 37 4 17348363 diploid Homo sapiens dbSNP 131 BOT TATCTTTTCTTTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC[T/C]CCTTATGCCCTCTGCTACACTCTGCACACTCCTGAGGTACATGAAGGCACAGAGATCTAT ATAGATCTCTGTGCCTTCATGTACCTCAGGAGTGTGCAGAGTGTAGCAGAGGGCATAAGG[A/G]GTCCATCTAAGTGACTGTCAGAAACAACTGAGAAAGACCAAAGTGGACAAAGAAAAGATA 708 3 +
rs10000092-131_T_R_1911627639 rs10000092 TOP [A/G] 78627116 CAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA 37 4 21895517 diploid Homo sapiens dbSNP 131 BOT AGTTTTGTAGTGGATTACATCTGAACTGAATTTTCAGTGCTGCTGTGTGCATATTAAATG[T/C]TTCCCTTACTTCCTGCTTTAGGATCCTAATTAGCATTATGCATAACCTTGAAAATAATCT AGATTATTTTCAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA[A/G]CATTTAATATGCACACAGCAGCACTGAAAATTCAGTTCAGATGTAATCCACTACAAAACT 705 3 -
rs10000105-131_T_F_1893943453 rs10000105 TOP [A/G] 50660895 TGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC 37 4 53623677 diploid Homo sapiens dbSNP 131 TOP AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC 783 3 +
rs10000119-131_T_R_1893947293 rs10000119 TOP [A/G] 61633103 GAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC 37 4 37796830 diploid Homo sapiens dbSNP 131 BOT AGAATTCTGTGTATCTGCTCTCTTCCACTTAGTGGAAGTGGTACTTGGTCAAATACATGT[T/C]GGTGATGGCGCTCACATTTTGGTTCATACAGCTATTAAACATGTATTTTCTCTCCAACTA TAGTTGGAGAGAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC[A/G]ACATGTATTTGACCAAGTACCACTTCCACTAAGTGGAAGAGAGCAGATACACAGAATTCT 759 3 -
rs10000124-131_B_R_1908800786 rs10000124 BOT [T/G] 62770967 CCAAGGAGATCCGGAAAGAACCAGAAGCTGATGGCATCCTGGAAGTAAGG 37 4 109106451 diploid Homo sapiens dbSNP 131 TOP ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta 708 3 -
rs10000154-131_T_F_1893949661 rs10000154 TOP [A/G] 75725318 TGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA 37 4 80666077 diploid Homo sapiens dbSNP 131 TOP TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG 708 3 +
rs1000016-131_B_R_1891268428 rs1000016 BOT [T/C] 45733180 GGACAGGGATACAGGGAGTAGGGGCTTTGAGAAAAGTGTAACTTATTTGC 37 2 235690982 diploid Homo sapiens dbSNP 131 TOP TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC 705 3 -
rs10000160-131_T_F_1895138379 rs10000160 TOP [A/G] 81609198 GGATGTTGTCACTGCTGTTTTGTGATCTAGCCTCCTCATAGCTGCTAGAG 37 4 69033099 diploid Homo sapiens dbSNP 131 TOP CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc 759 3 +
rs10000169-131_T_R_1891213580 rs10000169 TOP [A/G] 53670281 CACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG 37 4 77356246 diploid Homo sapiens dbSNP 131 BOT TATTCTAGGAACTATTTTCTATCCCTTGGCAATTAGCCATCTGTATAGTATTTTTAACTT[T/C]CTACGTGTTATTAACTGTAAGACTGTTTGAATTGTCAGGTCTTTGTGGTGAGCTGAATTC GAATTCAGCTCACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG[A/G]AAGTTAAAAATACTATACAGATGGCTAATTGCCAAGGGATAGAAAATAGTTCCTAGAATA 708 3 -

Total number of rows: 716526

Table truncated, full table size 295170 Kbytes.




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GPL19699_HumanOmniExpress-24-v1-0-B.csv.gz 72.2 Mb (ftp)(http) CSV

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