NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL20080 Query DataSets for GPL20080
Status Public on Apr 21, 2015
Title Agilent-022267 Streptococcus suis
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Streptococcus suis
Manufacturer Agilent
Manufacture protocol see manufacturer's website
 
 
Submission date Apr 20, 2015
Last update date Apr 21, 2015
Contact name liping feng
E-mail(s) flp2013@foxmail.com
Organization name Shanghai Laboratory Animal Research Center
Street address No. 3577 Jinke Rd., Shanghai
City shanghai
ZIP/Postal code 201203
Country China
 
Samples (22) GSM1662248, GSM1662249, GSM1716985, GSM1716986, GSM1716987, GSM1716988 
Series (3)
GSE68068 Investigating the effect of CodY mutation on the gene expression in Streptococcus suis serotype 2 SC19 strain.
GSE70092 RelA/(p)ppGpp regulates the glucose-starvation induced stringent response in the zoonostic Streptococcus suis
GSE112779 Streptococcus suis 05ZY: wt vs SSU05_0930 knockout strain

Data table header descriptions
ID
ControlType
SEQUENCE
description
ORF
SPOT_ID

Data table
ID ControlType SEQUENCE description ORF SPOT_ID
GE_BrightCorner 1 GE_BrightCorner
DarkCorner 1 DarkCorner
CUST_854_PI403427771 0 TGTTCCAGCTTCTGCTGTCGAATCATTAATTGGAGTAACAATTTCAGAGGAGACAGAAGA >gi|146318517|ref|YP_001198229.1| hypothetical protein SSU05_0863 [Streptococcus suis 05ZYH33] SSU05_0863 CUST_854_PI403427771
CUST_453_PI403427771 0 AGCAGAACATTCTTTGACGAAATGACCTCTAATGACCGATATTATTGGTCTGCTGGACGT >gi|146318115|ref|YP_001197827.1| hypothetical protein SSU05_0461 [Streptococcus suis 05ZYH33] SSU05_0461 CUST_453_PI403427771
CUST_1190_PI403427771 0 GGGAGTAAACGCCTCATTCGCTCTGCAATAGAATATGCCCTAGAACATCAATTGAAGATG >gi|146318856|ref|YP_001198568.1| isocitrate dehydrogenase [Streptococcus suis 05ZYH33] SSU05_1202 CUST_1190_PI403427771
CUST_1592_PI403427771 0 TTATCCAGGGTGATTCTGGTATCGGTAAGAGTGAGACTGGTCTTGAGTTGGTTAAACGAG >gi|146319260|ref|YP_001198972.1| HPr kinase/phosphorylase [Streptococcus suis 05ZYH33] SSU05_1606 CUST_1592_PI403427771
CUST_5_PI403427771 0 TGGCAGAAATCTTTGGTGTCAGTCTGGATTATCTGGTTTTAGGGAAAGAACCTGAGAAGG >gi|146317667|ref|YP_001197379.1| transcriptional regulator [Streptococcus suis 05ZYH33] SSU05_0005 CUST_5_PI403427771
CUST_1260_PI403427771 0 GCTGCTGAGACACAAGAATCTACTTCGACTGACACGACAGAAACAGAAACAAGTTCTAGC >gi|146318926|ref|YP_001198638.1| hypothetical protein SSU05_1273 [Streptococcus suis 05ZYH33] SSU05_1273 CUST_1260_PI403427771
CUST_280_PI403427771 0 ATTGACAGTAGCCAGTCTGACAAAAGGTTTGGCTGTGTCTACGAAATCACCTGCATATAT ">gi|146317942|ref|YP_001197654.1| ABC-type cobalt transport system, permease component CbiQ and related transporters [Streptococcus suis 05ZYH33]" SSU05_0286 CUST_280_PI403427771
CUST_145_PI403427771 0 CTTGGAAGAACCAGTTCGTCAGATTGCCTATAACGCAGGCTATGAAGGTTCAGTTATCAT >gi|146317807|ref|YP_001197519.1| GroEL [Streptococcus suis 05ZYH33] SSU05_0149 CUST_145_PI403427771
CUST_1537_PI403427771 0 GGTGGTGGTACTCAGCAAACAGATATGGCTATTGCTGCAGAACACCTATTTAAAAACACG >gi|146319204|ref|YP_001198916.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis 05ZYH33] SSU05_1550 CUST_1537_PI403427771
CUST_1814_PI403427771 0 CCATTGCCACTGTTTGAGCAGTTTATCCATCGTCGTCTACGGAATTTCTTCACTTTCATG >gi|146319484|ref|YP_001199196.1| Mg2+ and Co2+ transporter [Streptococcus suis 05ZYH33] SSU05_1830 CUST_1814_PI403427771
CUST_1394_PI403427771 0 GAGGAGATTGAACAAGCCATTGCCACAGCAGCTTTTAGTCAAGATTTAAAACGGATGAGT ">gi|146319060|ref|YP_001198772.1| ABC-type multidrug transport system, ATPase and permease component [Streptococcus suis 05ZYH33]" SSU05_1406 CUST_1394_PI403427771
CUST_1277_PI403427771 0 AGGAGAAATTGCGACAAAACACATGAAGGATGAATACACCTGGGAAAAAATCGTCCAAGA >gi|146318943|ref|YP_001198655.1| glycosyltransferase [Streptococcus suis 05ZYH33] SSU05_1289 CUST_1277_PI403427771
CUST_1315_PI403427771 0 GGAAATGGCAAAGGAAATTCAGGAAGTCGCAGAATCAGGTATTCAGATTGCCCTTGTTAT >gi|146318981|ref|YP_001198693.1| uridylate kinase [Streptococcus suis 05ZYH33] SSU05_1327 CUST_1315_PI403427771
CUST_541_PI403427771 0 TCTTTGTCATGATTAGCCAGTCAGGTGAAACTGCTGATAGCCGTCAGGTATTGGTTAAAG >gi|146318203|ref|YP_001197915.1| D-fructose-6-phosphate amidotransferase [Streptococcus suis 05ZYH33] SSU05_0549 CUST_541_PI403427771
CUST_191_PI403427771 0 AAAAAGGCGATGTCTTGGAGTTGATTCTCTATACAACCGACTTTGAGTGTACTGTTCGGG >gi|146317853|ref|YP_001197565.1| x-prolyl-dipeptidyl aminopeptidase [Streptococcus suis 05ZYH33] SSU05_0197 CUST_191_PI403427771
CUST_1686_PI403427771 0 ATAGCAGAGCTGACTAGTCAGCAGGTCAATCTGGATTTTCAAGTCCTGACAGTTGAGAAG >gi|146319356|ref|YP_001199068.1| site-specific tyrosine recombinase XerD-like protein [Streptococcus suis 05ZYH33] SSU05_1702 CUST_1686_PI403427771
CUST_1763_PI403427771 0 CTATGGTTATCAACATGATGGCAACTCGTGAAGTATGGCCATTCTTCGCACTTGGTTTTG >gi|146319433|ref|YP_001199145.1| mannose-specific PTS IIC [Streptococcus suis 05ZYH33] SSU05_1779 CUST_1763_PI403427771
CUST_1469_PI403427771 0 TGCCTGCGGGTGCGGTATCTGTTTTTGGCTTGTTACATAATGTTGATAAGGATATTCAAG >gi|146319136|ref|YP_001198848.1| hypothetical protein SSU05_1482 [Streptococcus suis 05ZYH33] SSU05_1482 CUST_1469_PI403427771

Total number of rows: 2238

Table truncated, full table size 459 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap