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Status
Public on Mar 04, 2016
Title
Agilent-031795 L.lactis_and_2_phages
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Lactococcus lactis
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
L. lactis + 2 phages Arrays of this design have barcodes that begin with 16031795 or 2531795. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Submission date
Mar 03, 2016
Last update date
Mar 04, 2016
Contact name
Mogens Kilstrup
E-mail(s)
mki@bio.dtu.dk
Phone
+45 25538815
Organization name
Technical University of Denmark
Department
DTU Systems Biology
Lab
Metabolic Signaling and Regulation
Street address
Building 301 room 158
City
Kgs. Lyngby
ZIP/Postal code
DK2800
Country
Denmark
Samples (26)
GSM2080392 , GSM2080393 , GSM2080394 , GSM2080395 , GSM2080396 , GSM2080397
GSM2080398 ,
GSM2080399 ,
GSM2374963 ,
GSM2374964 ,
GSM2374965 ,
GSM2374966 ,
GSM2374967 ,
GSM2374968 ,
GSM2374969 ,
GSM2374970 ,
GSM2374971 ,
GSM2374972 ,
GSM2374973 ,
GSM2374974 ,
GSM2374975 ,
GSM2374976 ,
GSM2374977 ,
GSM2374978 ,
GSM2374979 ,
GSM2374980
Series (2)
GSE78882
Gene expression signature after abrupt glucose starvation in Lactococcus lactis
GSE89508
Gene expression signature in Lactococcus lactis after ethanol, butanol or hexanol exposure
Data table header descriptions
ID
Agilent feature number
COL
Column
ROW
Row
NAME
NAME
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
CHROMOSOMAL_LOCATION
Chromosomal Location
SEQUENCE
Sequence
Data table
ID
COL
ROW
NAME
SPOT_ID
CONTROL_TYPE
CHROMOSOMAL_LOCATION
SEQUENCE
1
96
164
GE_BrightCorner
GE_BrightCorner
pos
2
96
162
DarkCorner
DarkCorner
pos
3
96
160
DarkCorner
DarkCorner
pos
4
96
158
llmg_1919_1
llmg_1919_1
FALSE
unmapped
TATTATTGATTACAATGACGGATACGATAGGAGGAATGCAAGCTTTAGCACCAAAAGCC
5
96
156
llmg_0444_2
llmg_0444_2
FALSE
unmapped
TAGTGGTTGCTGGTGAAGAAGCTGGAAGTAAATTGACAAAAGCTCAAGATTTAGGAATC
6
96
154
llmg_1833_4
llmg_1833_4
FALSE
unmapped
AAGATATCCACAAATTACATTTGCTCTTGATGCCAATCGAAGTTTTCAACTGACAGACT
7
96
152
llmg_2370_4
llmg_2370_4
FALSE
unmapped
CAAAATTCTCAACACAAGCTTATACTCGTTGCGAACGTTGCGGACGTCCACATTCAGTT
8
96
150
llmg_pseudo_225
llmg_pseudo_225
FALSE
unmapped
ATATGGACCAAGTGTTTGGTGCAGCATTAAAGACTGTGGAGAAAGAATTCAATGAGTAAT
9
96
148
llmg_rRNA_305
llmg_rRNA_305
FALSE
unmapped
GGAGGACCATCTCCCAACCCTAAATACTCCTTAGTGACCGATAGTGAACCAGTACCGTGA
10
96
146
llmg_0704_3
llmg_0704_3
FALSE
unmapped
ACCGAGTAAATCATAAATATGTATTTTCACAAACAAGAGGTGCAATGGGTGCAGCTATTT
11
96
144
llmg_0972_5
llmg_0972_5
FALSE
unmapped
GAGTTAAACATTGGCATGGAGCGACTAAGGATAGTTGGTTTAGTCATGTCGCCATTACA
12
96
142
llmg_0961_4
llmg_0961_4
FALSE
unmapped
CTATTGGACTTTTAAACGTCACTTCCGTTTTAGACCCAGACCTAATCTTGATAGGTGGC
13
96
140
llmg_0219_5
llmg_0219_5
FALSE
unmapped
CGATTCGTTTGGTTCGTAAAGATAGAGCAGAAATAAGACATATGTTAAAATGGTTCATTT
14
96
138
llmg_2154_4
llmg_2154_4
FALSE
unmapped
ACTTTGGTTGAAAAACGTGAGTTGGAACGTTTGCAAGCGAAAATGAAGGAACAACTTAT
15
96
136
llmg_0538_2
llmg_0538_2
FALSE
unmapped
GACTCCTGGTGATGTCATGAAACTTGAATTTGAAATTACAAAGTTCCGTGGAAAAGTAG
16
96
134
llmg_tRNA_224
llmg_tRNA_224
FALSE
unmapped
CTTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGACTATATTATTAAAACTCGGG
17
96
132
llmg_0650_4
llmg_0650_4
FALSE
unmapped
TCCCCTTCTTCTCTCTTGGAATGGGCTGGATTCTCCTAGCAGTCCTTGGATTTATAATC
18
96
130
llmg_2290_5
llmg_2290_5
FALSE
unmapped
GTTAGTGATTTGCCAATCGGTTTTTATCCAGATGATGAAGTTGCGAAAAATTTTGAAGT
19
96
128
llmg_1580_1
llmg_1580_1
FALSE
unmapped
TTTGAAATTTTCGGCAAAACTGCTTGAAGTGGCTATTTATGAAAGTGATGAACTCTACTG
20
96
126
llmg_0059_5
llmg_0059_5
FALSE
unmapped
TCGCAGAATGATAACAGCAAATATGATTCAGTCATTTCAGATTTAAAGTCAGAACTTGCA
Total number of rows: 15744 Table truncated, full table size 1685 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL21561_031795_D_GEO_20101220.txt.gz
489.7 Kb
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