Data table |
ID |
probeset_id |
seqname |
strand |
start |
stop |
total_probes |
gene_assignment |
mrna_assignment |
swissprot |
unigene |
GO_biological_process |
GO_cellular_component |
GO_molecular_function |
pathway |
protein_domains |
crosshyb_type |
category |
SPOT_ID |
GB_ACC |
15795586 |
15795586 |
chr1 |
+ |
1903 |
9817 |
34 |
AK242339 // Os01g0100100 // Os01g0100100 // --- // 4326813 /// NM_001048268 // Os01g0100100 // Os01g0100100 // --- // 4326813 |
LOC_Os01g01010.1 // Rice Genome Annotation Project at MSU // cDNA|TBC domain containing protein, expressed gene:LOC_Os01g01010 // chr1 // 120 // 120 // 6 // 5 // 0 /// LOC_Os01g01010.2 // Rice Genome Annotation Project at MSU // cDNA|TBC domain containing protein, expressed gene:LOC_Os01g01010 // chr1 // 120 // 120 // 6 // 5 // 0 /// BGIOSGA002569-TA // BGI Rice Genome // locus=Chr01:30220:36442:+ gene:BGIOSGA002569 // chr1 // 133 // 133 // 4 // 3 // 0 /// AK242339 // GenBank // Oryza sativa Japonica Group cDNA, clone: J075199P03, full insert sequence. // chr1 // 125 // 125 // 15 // 12 // 0 /// NM_001048268 // RefSeq // Oryza sativa Japonica Group Os01g0100100 (Os01g0100100) mRNA, complete cds. // chr1 // 100 // 100 // 16 // 16 // 0 /// Os01t0100100-01 // Rice Annotation Project Database // RabGAP/TBC domain containing protein. // chr1 // 133 // 133 // 4 // 3 // 0 |
LOC_Os01g01010.1 // B8ACR0 /// LOC_Os01g01010.1 // Q655M0 /// BGIOSGA002569-TA // B8ACR0 /// NM_001048268 // Q0JRI1 |
AK242339 // Os.24643 // callus| flower| leaf| panicle| seed| stem /// NM_001048268 // Os.24643 // callus| flower| leaf| panicle| seed| stem |
LOC_Os01g01010.1 // GO:0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// LOC_Os01g01010.1 // GO:0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// LOC_Os01g01010.2 // GO:0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// BGIOSGA002569-TA // GO:0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// BGIOSGA002569-TA // GO:0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// NM_001048268 // GO:0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// NM_001048268 // GO:0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation |
LOC_Os01g01010.1 // GO:0005622 // intracellular // inferred from electronic annotation /// LOC_Os01g01010.2 // GO:0005622 // intracellular // inferred from electronic annotation /// BGIOSGA002569-TA // GO:0005622 // intracellular // inferred from electronic annotation |
LOC_Os01g01010.1 // GO:0005097 // Rab GTPase activator activity // inferred from electronic annotation /// LOC_Os01g01010.2 // GO:0005097 // Rab GTPase activator activity // inferred from electronic annotation /// BGIOSGA002569-TA // GO:0005097 // Rab GTPase activator activity // inferred from electronic annotation /// NM_001048268 // GO:0005097 // Rab GTPase activator activity // inferred from electronic annotation |
--- |
LOC_Os01g01010.1 // Pfam // IPR000195 // Rab-GTPase-TBC domain /// LOC_Os01g01010.2 // Pfam // IPR000195 // Rab-GTPase-TBC domain /// BGIOSGA002569-TA // Pfam // IPR000195 // Rab-GTPase-TBC domain |
1 |
main |
LOC_Os01g01010.1 |
|
15795607 |
15795607 |
chr1 |
+ |
10218 |
11435 |
22 |
NM_001185187 // Os01g0100200 // Os01g0100200 // --- // 4326453 |
NM_001185187 // RefSeq // Oryza sativa Japonica Group Os01g0100200 (Os01g0100200) mRNA, complete cds. // chr1 // 100 // 100 // 6 // 6 // 0 |
NM_001185187 // Q655L9 |
NM_001185187 // Os.37240 // leaf| stem |
--- |
NM_001185187 // GO:0009536 // plastid // inferred from reviewed computational analysis |
--- |
--- |
--- |
1 |
main |
|
NM_001185187 |
15795612 |
15795612 |
chr1 |
+ |
11648 |
14915 |
25 |
AK101455 // Os01g0100400 // Os01g0100400 // --- // 4326454 /// NM_001048270 // Os01g0100400 // Os01g0100400 // --- // 4326454 |
LOC_Os01g01030.1 // Rice Genome Annotation Project at MSU // cDNA|monocopper oxidase, putative, expressed gene:LOC_Os01g01030 // chr1 // 100 // 100 // 7 // 7 // 0 /// BGIOSGA002571-TA // BGI Rice Genome // locus=Chr01:39545:42130:+ gene:BGIOSGA002571 // chr1 // 100 // 100 // 6 // 6 // 0 /// AK101455 // GenBank // Oryza sativa Japonica Group cDNA clone:J033040A20, full insert sequence. // chr1 // 100 // 100 // 3 // 3 // 0 /// NM_001048270 // RefSeq // Oryza sativa Japonica Group Os01g0100400 (Os01g0100400) mRNA, complete cds. // chr1 // 125 // 125 // 10 // 8 // 0 |
LOC_Os01g01030.1 // B8ACR3 /// LOC_Os01g01030.1 // Q655L8 /// BGIOSGA002571-TA // B8ACR3 /// AK101455 // Q655L8 /// NM_001048270 // Q655L8 |
AK101455 // Os.33183 // callus| flower| leaf| panicle| root| stem /// NM_001048270 // Os.33183 // callus| flower| leaf| panicle| root| stem |
LOC_Os01g01030.1 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// BGIOSGA002571-TA // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// AK101455 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// NM_001048270 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation |
LOC_Os01g01030.1 // GO:0005886 // plasma membrane // inferred from electronic annotation /// LOC_Os01g01030.1 // GO:0009506 // plasmodesma // inferred from electronic annotation /// BGIOSGA002571-TA // GO:0005886 // plasma membrane // inferred from electronic annotation /// BGIOSGA002571-TA // GO:0009506 // plasmodesma // inferred from electronic annotation /// AK101455 // GO:0005886 // plasma membrane // inferred from electronic annotation /// AK101455 // GO:0009506 // plasmodesma // inferred from electronic annotation /// NM_001048270 // GO:0005886 // plasma membrane // inferred from electronic annotation /// NM_001048270 // GO:0009506 // plasmodesma // inferred from electronic annotation |
LOC_Os01g01030.1 // GO:0005507 // copper ion binding // inferred from electronic annotation /// LOC_Os01g01030.1 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// BGIOSGA002571-TA // GO:0005507 // copper ion binding // inferred from electronic annotation /// BGIOSGA002571-TA // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// AK101455 // GO:0005507 // copper ion binding // inferred from electronic annotation /// AK101455 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// NM_001048270 // GO:0005507 // copper ion binding // inferred from electronic annotation /// NM_001048270 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation |
--- |
LOC_Os01g01030.1 // Pfam // IPR001117 // Multicopper oxidase, type 1 /// LOC_Os01g01030.1 // Pfam // IPR011706 // Multicopper oxidase, type 2 /// LOC_Os01g01030.1 // Pfam // IPR011707 // Multicopper oxidase, type 3 /// BGIOSGA002571-TA // Pfam // IPR001117 // Multicopper oxidase, type 1 /// BGIOSGA002571-TA // Pfam // IPR011706 // Multicopper oxidase, type 2 /// BGIOSGA002571-TA // Pfam // IPR011707 // Multicopper oxidase, type 3 |
1 |
main |
LOC_Os01g01030.1 |
|
15795622 |
15795622 |
chr1 |
+ |
15292 |
19323 |
27 |
AK067316 // Os01g0100500 // Os01g0100500 // --- // 4326455 |
LOC_Os01g01040.4 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01040 // chr1 // 100 // 100 // 4 // 4 // 0 /// LOC_Os01g01040.1 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01040 // chr1 // 133 // 133 // 4 // 3 // 0 /// LOC_Os01g01040.2 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01040 // chr1 // 100 // 100 // 6 // 6 // 0 /// BGIOSGA002572-TA // BGI Rice Genome // locus=Chr01:43370:46364:+ gene:BGIOSGA002572 // chr1 // 100 // 100 // 2 // 2 // 0 /// AK067316 // GenBank // Oryza sativa Japonica Group cDNA clone:J013104J17, full insert sequence. // chr1 // 133 // 133 // 4 // 3 // 0 /// Os01t0100500-01 // Rice Annotation Project Database // Immunoglobulin-like domain containing protein. // chr1 // 200 // 200 // 2 // 1 // 0 |
LOC_Os01g01040.1 // A2WJL2 /// LOC_Os01g01040.1 // Q93VG6 /// LOC_Os01g01040.2 // A2WJL2 /// LOC_Os01g01040.2 // Q93VG6 /// BGIOSGA002572-TA // A2WJL2 |
AK067316 // Os.27571 // callus| flower| leaf| panicle| root| seed| stem |
LOC_Os01g01040.1 // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// LOC_Os01g01040.1 // GO:0008150 // biological_process // inferred from electronic annotation /// LOC_Os01g01040.1 // GO:0016558 // protein import into peroxisome matrix // inferred from electronic annotation /// LOC_Os01g01040.2 // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// LOC_Os01g01040.2 // GO:0008150 // biological_process // inferred from electronic annotation /// LOC_Os01g01040.2 // GO:0016558 // protein import into peroxisome matrix // inferred from electronic annotation /// BGIOSGA002572-TA // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// BGIOSGA002572-TA // GO:0008150 // biological_process // inferred from electronic annotation /// BGIOSGA002572-TA // GO:0016558 // protein import into peroxisome matrix // inferred from electronic annotation |
--- |
LOC_Os01g01040.1 // GO:0003674 // molecular_function // inferred from electronic annotation /// LOC_Os01g01040.2 // GO:0003674 // molecular_function // inferred from electronic annotation /// BGIOSGA002572-TA // GO:0003674 // molecular_function // inferred from electronic annotation |
--- |
--- |
1 |
main |
LOC_Os01g01040.4 |
|
15795638 |
15795638 |
chr1 |
+ |
21841 |
25971 |
26 |
AK121362 // Os01g0100600 // Os01g0100600 // --- // 4326456 |
LOC_Os01g01050.1 // Rice Genome Annotation Project at MSU // cDNA|R3H domain containing protein, expressed gene:LOC_Os01g01050 // chr1 // 100 // 100 // 3 // 3 // 0 /// AK121362 // GenBank // Oryza sativa Japonica Group cDNA clone:J023124E16, full insert sequence. // chr1 // 100 // 100 // 2 // 2 // 0 |
AK121362 // Q655L7 |
AK121362 // Os.59545 // flower| leaf| stem |
--- |
--- |
LOC_Os01g01050.1 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// AK121362 // GO:0003676 // nucleic acid binding // inferred from electronic annotation |
--- |
LOC_Os01g01050.1 // Pfam // IPR001374 // Single-stranded nucleic acid binding R3H /// LOC_Os01g01050.1 // Pfam // IPR024771 // SUZ domain |
1 |
main |
LOC_Os01g01050.1 |
|
15795648 |
15795648 |
chr1 |
+ |
26136 |
27651 |
14 |
CT833925 // Os01g0100700 // Os01g0100700 // --- // 4326457 /// CT833926 // Os01g0100700 // Os01g0100700 // --- // 4326457 |
CT833925 // GenBank // Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042M23, full insert sequence. // chr1 // 75 // 75 // 3 // 4 // 0 /// CT833926 // GenBank // Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA118O11, full insert sequence. // chr1 // 75 // 75 // 3 // 4 // 0 |
CT833925 // Q93VC6 /// CT833926 // Q93VC6 |
CT833925 // Os.4725 // callus| flower| leaf| panicle| root| seed| stem /// CT833926 // Os.4725 // callus| flower| leaf| panicle| root| seed| stem |
CT833925 // GO:0006412 // translation // inferred from electronic annotation /// CT833926 // GO:0006412 // translation // inferred from electronic annotation |
CT833925 // GO:0005840 // ribosome // inferred from electronic annotation /// CT833925 // GO:0015935 // small ribosomal subunit // inferred from electronic annotation /// CT833925 // GO:0030529 // ribonucleoprotein complex // inferred from electronic annotation /// CT833926 // GO:0005840 // ribosome // inferred from electronic annotation /// CT833926 // GO:0015935 // small ribosomal subunit // inferred from electronic annotation /// CT833926 // GO:0030529 // ribonucleoprotein complex // inferred from electronic annotation |
CT833925 // GO:0003723 // RNA binding // inferred from electronic annotation /// CT833925 // GO:0003735 // structural constituent of ribosome // inferred from electronic annotation /// CT833926 // GO:0003723 // RNA binding // inferred from electronic annotation /// CT833926 // GO:0003735 // structural constituent of ribosome // inferred from electronic annotation |
--- |
--- |
1 |
main |
|
CT833925 |
15795654 |
15795654 |
chr1 |
+ |
28818 |
33493 |
32 |
--- |
LOC_Os01g01070.3 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01070 // chr1 // 200 // 200 // 2 // 1 // 0 /// LOC_Os01g01070.2 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01070 // chr1 // 100 // 100 // 2 // 2 // 0 /// BGIOSGA002575-TA // BGI Rice Genome // locus=Chr01:56731:60911:+ gene:BGIOSGA002575 // chr1 // 133 // 133 // 4 // 3 // 0 |
LOC_Os01g01070.2 // B8ACR5 /// LOC_Os01g01070.2 // Q655L6 /// BGIOSGA002575-TA // B8ACR5 |
--- |
LOC_Os01g01070.3 // GO:0008152 // metabolic process // inferred from electronic annotation /// LOC_Os01g01070.2 // GO:0008152 // metabolic process // inferred from electronic annotation |
--- |
LOC_Os01g01070.3 // GO:0003824 // catalytic activity // inferred from electronic annotation /// LOC_Os01g01070.3 // GO:0005488 // binding // inferred from electronic annotation /// LOC_Os01g01070.2 // GO:0003824 // catalytic activity // inferred from electronic annotation /// LOC_Os01g01070.2 // GO:0005488 // binding // inferred from electronic annotation |
--- |
LOC_Os01g01070.3 // Pfam // IPR012458 // Protein of unknown function DUF1664 /// LOC_Os01g01070.2 // Pfam // IPR012458 // Protein of unknown function DUF1664 /// BGIOSGA002575-TA // Pfam // IPR012458 // Protein of unknown function DUF1664 |
1 |
main |
LOC_Os01g01070.3 |
|
15795673 |
15795673 |
chr1 |
+ |
34581 |
40180 |
32 |
AK243573 // Os01g0100900 // Os01g0100900 // --- // 4326459 /// EU152208 // Os01g0100900 // Os01g0100900 // --- // 4326459 |
LOC_Os01g01080.1 // Rice Genome Annotation Project at MSU // cDNA|decarboxylase, putative, expressed gene:LOC_Os01g01080 // chr1 // 100 // 100 // 2 // 2 // 0 /// LOC_Os01g01080.3 // Rice Genome Annotation Project at MSU // cDNA|decarboxylase, putative, expressed gene:LOC_Os01g01080 // chr1 // 100 // 100 // 2 // 2 // 0 /// AK243573 // GenBank // Oryza sativa Japonica Group cDNA, clone: J100082C01, full insert sequence. // chr1 // 133 // 133 // 4 // 3 // 0 /// EU152208 // GenBank HTC // Oryza sativa Japonica Group clone OsLS251 sphingosine 1-phosphate lyase mRNA, complete cds. // chr1 // 100 // 100 // 2 // 2 // 0 |
LOC_Os01g01080.1 // B1NY92 /// LOC_Os01g01080.1 // B7FAK6 /// LOC_Os01g01080.1 // B8ACR6 /// AK243573 // B7FAK6 /// AK243573 // Q52RG7 /// AK243573 // B1NY92 /// EU152208 // B1NY92 /// EU152208 // Q52RG7 /// EU152208 // B7FAK6 |
AK243573 // Os.21356 // callus| flower| leaf| panicle| root| seed| stem /// EU152208 // Os.21356 // callus| flower| leaf| panicle| root| seed| stem |
LOC_Os01g01080.1 // GO:0006915 // apoptotic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0006629 // lipid metabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0030149 // sphingolipid catabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0009407 // toxin catabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0051788 // response to misfolded protein // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0080129 // proteasome core complex assembly // inferred from electronic annotation /// LOC_Os01g01080.3 // GO:0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// AK243573 // GO:0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// AK243573 // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// AK243573 // GO:0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// AK243573 // GO:0009407 // toxin catabolic process // inferred from electronic annotation /// AK243573 // GO:0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// AK243573 // GO:0030149 // sphingolipid catabolic process // inferred from electronic annotation /// AK243573 // GO:0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// AK243573 // GO:0051788 // response to misfolded protein // inferred from electronic annotation /// AK243573 // GO:0080129 // proteasome core complex assembly // inferred from electronic annotation /// AK243573 // GO:0006629 // lipid metabolic process // inferred from electronic annotation /// AK243573 // GO:0006665 // sphingolipid metabolic process // inferred from electronic annotation /// AK243573 // GO:0006915 // apoptotic process // inferred from electronic annotation /// EU152208 // GO:0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// EU152208 // GO:0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// EU152208 // GO:0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// EU152208 // GO:0009407 // toxin catabolic process // inferred from electronic annotation /// EU152208 // GO:0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// EU152208 // GO:0030149 // sphingolipid catabolic process // inferred from electronic annotation /// EU152208 // GO:0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// EU152208 // GO:0051788 // response to misfolded protein // inferred from electronic annotation /// EU152208 // GO:0080129 // proteasome core complex assembly // inferred from electronic annotation /// EU152208 // GO:0006629 // lipid metabolic process // inferred from electronic annotation /// EU152208 // GO:0006665 // sphingolipid metabolic process // inferred from electronic annotation /// EU152208 // GO:0006915 // apoptotic process // inferred from electronic annotation |
LOC_Os01g01080.1 // GO:0016021 // integral to membrane // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0016020 // membrane // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK243573 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK243573 // GO:0016020 // membrane // inferred from electronic annotation /// AK243573 // GO:0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// AK243573 // GO:0016021 // integral to membrane // inferred from electronic annotation /// EU152208 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// EU152208 // GO:0016020 // membrane // inferred from electronic annotation /// EU152208 // GO:0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// EU152208 // GO:0016021 // integral to membrane // inferred from electronic annotation |
LOC_Os01g01080.1 // GO:0003824 // catalytic activity // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0008117 // sphinganine-1-phosphate aldolase activity // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0016829 // lyase activity // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0016831 // carboxy-lyase activity // inferred from electronic annotation /// LOC_Os01g01080.1 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// LOC_Os01g01080.3 // GO:0016831 // carboxy-lyase activity // inferred from electronic annotation /// LOC_Os01g01080.3 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// AK243573 // GO:0003824 // catalytic activity // inferred from electronic annotation /// AK243573 // GO:0016829 // lyase activity // inferred from electronic annotation /// AK243573 // GO:0016831 // carboxy-lyase activity // inferred from electronic annotation /// AK243573 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// AK243573 // GO:0008117 // sphinganine-1-phosphate aldolase activity // inferred from electronic annotation /// EU152208 // GO:0003824 // catalytic activity // inferred from electronic annotation /// EU152208 // GO:0016829 // lyase activity // inferred from electronic annotation /// EU152208 // GO:0016831 // carboxy-lyase activity // inferred from electronic annotation /// EU152208 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// EU152208 // GO:0008117 // sphinganine-1-phosphate aldolase activity // inferred from electronic annotation |
--- |
LOC_Os01g01080.1 // Pfam // IPR002129 // Pyridoxal phosphate-dependent decarboxylase /// LOC_Os01g01080.3 // Pfam // IPR002129 // Pyridoxal phosphate-dependent decarboxylase |
1 |
main |
LOC_Os01g01080.1 |
|
15795692 |
15795692 |
chr1 |
+ |
54914 |
56972 |
11 |
--- |
LOC_Os01g01110.1 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01110 // chr1 // 100 // 100 // 11 // 11 // 0 |
LOC_Os01g01110.1 // B8ACR7 /// LOC_Os01g01110.1 // Q93WB9 |
--- |
LOC_Os01g01110.1 // GO:0006468 // protein phosphorylation // inferred from electronic annotation |
--- |
LOC_Os01g01110.1 // GO:0004672 // protein kinase activity // inferred from electronic annotation /// LOC_Os01g01110.1 // GO:0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// LOC_Os01g01110.1 // GO:0005524 // ATP binding // inferred from electronic annotation /// LOC_Os01g01110.1 // GO:0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation |
--- |
LOC_Os01g01110.1 // Pfam // IPR000719 // Protein kinase, catalytic domain |
1 |
main |
LOC_Os01g01110.1 |
|
15795694 |
15795694 |
chr1 |
+ |
57658 |
60090 |
19 |
--- |
BGIOSGA002578-TA // BGI Rice Genome // locus=Chr01:85444:87876:+ gene:BGIOSGA002578 // chr1 // 173 // 173 // 19 // 11 // 0 |
BGIOSGA002578-TA // B8ACR8 |
--- |
BGIOSGA002578-TA // GO:0008150 // biological_process // inferred from electronic annotation |
--- |
--- |
--- |
BGIOSGA002578-TA // Pfam // IPR002885 // Pentatricopeptide repeat |
1 |
main |
BGIOSGA002578-TA |
|
15795696 |
15795696 |
chr1 |
+ |
61059 |
64537 |
26 |
AK104517 // Os01g0101200 // Os01g0101200 // --- // 4326460 /// AK119457 // Os01g0101200 // Os01g0101200 // --- // 4326460 /// NM_001048276 // Os01g0101200 // Os01g0101200 // --- // 4326460 |
LOC_Os01g01120.1 // Rice Genome Annotation Project at MSU // cDNA|enolase-phosphatase E1, putative, expressed gene:LOC_Os01g01120 // chr1 // 267 // 267 // 8 // 3 // 0 /// LOC_Os01g01130.1 // Rice Genome Annotation Project at MSU // cDNA|snurportin-1, putative, expressed gene:LOC_Os01g01130 // chr1 // 100 // 100 // 1 // 1 // 0 /// BGIOSGA002579-TA // BGI Rice Genome // locus=Chr01:88890:90131:+ gene:BGIOSGA002579 // chr1 // 200 // 200 // 4 // 2 // 0 /// AK104517 // GenBank // Oryza sativa Japonica Group cDNA clone:006-303-C10, full insert sequence. // chr1 // 267 // 267 // 8 // 3 // 0 /// AK119457 // GenBank // Oryza sativa Japonica Group cDNA clone:001-133-E05, full insert sequence. // chr1 // 175 // 175 // 7 // 4 // 0 /// NM_001048276 // RefSeq // Oryza sativa Japonica Group Os01g0101200 (Os01g0101200) mRNA, partial cds. // chr1 // 150 // 150 // 3 // 2 // 0 |
LOC_Os01g01120.1 // B7EWK0 /// LOC_Os01g01120.1 // B8ACR9 /// LOC_Os01g01120.1 // Q0JRH3 /// LOC_Os01g01130.1 // A2ZN88 /// LOC_Os01g01130.1 // Q0JRH2 /// BGIOSGA002579-TA // B8ACR9 /// AK104517 // B7EWK0 /// AK119457 // B7EWK0 /// NM_001048276 // B7EWK0 /// NM_001048276 // Q0JRH3 |
AK104517 // Os.19507 // flower| leaf| panicle| root| stem /// AK119457 // Os.19507 // flower| leaf| panicle| root| stem /// NM_001048276 // Os.19507 // flower| leaf| panicle| root| stem |
LOC_Os01g01120.1 // GO:0008152 // metabolic process // inferred from electronic annotation /// LOC_Os01g01120.1 // GO:0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// BGIOSGA002579-TA // GO:0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// AK104517 // GO:0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// AK119457 // GO:0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// NM_001048276 // GO:0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation |
AK104517 // GO:0009536 // plastid // inferred from reviewed computational analysis /// AK119457 // GO:0009536 // plastid // inferred from reviewed computational analysis /// NM_001048276 // GO:0009536 // plastid // inferred from reviewed computational analysis |
LOC_Os01g01120.1 // GO:0003824 // catalytic activity // inferred from electronic annotation /// LOC_Os01g01120.1 // GO:0046872 // metal ion binding // inferred from electronic annotation /// LOC_Os01g01120.1 // GO:0043874 // acireductone synthase activity // inferred from electronic annotation /// LOC_Os01g01120.1 // GO:0000287 // magnesium ion binding // inferred from electronic annotation /// BGIOSGA002579-TA // GO:0000287 // magnesium ion binding // inferred from electronic annotation /// BGIOSGA002579-TA // GO:0043874 // acireductone synthase activity // inferred from electronic annotation /// AK104517 // GO:0000287 // magnesium ion binding // inferred from electronic annotation /// AK104517 // GO:0043874 // acireductone synthase activity // inferred from electronic annotation /// AK119457 // GO:0000287 // magnesium ion binding // inferred from electronic annotation /// AK119457 // GO:0043874 // acireductone synthase activity // inferred from electronic annotation /// NM_001048276 // GO:0000287 // magnesium ion binding // inferred from electronic annotation /// NM_001048276 // GO:0043874 // acireductone synthase activity // inferred from electronic annotation |
--- |
BGIOSGA002579-TA // Pfam // IPR023214 // HAD-like domain |
1 |
main |
LOC_Os01g01120.1 |
|
15795704 |
15795704 |
chr1 |
+ |
68675 |
69131 |
18 |
--- |
LOC_Os01g01140.1 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01140 // chr1 // 100 // 100 // 18 // 18 // 0 /// BGIOSGA002580-TA // BGI Rice Genome // locus=Chr01:95516:95972:+ gene:BGIOSGA002580 // chr1 // 100 // 100 // 18 // 18 // 0 |
LOC_Os01g01140.1 // A2WJM0 /// LOC_Os01g01140.1 // Q7F2F6 /// BGIOSGA002580-TA // A2WJM0 |
--- |
BGIOSGA002580-TA // GO:0042742 // defense response to bacterium // inferred from electronic annotation /// BGIOSGA002580-TA // GO:0009870 // defense response signaling pathway, resistance gene-dependent // inferred from electronic annotation |
--- |
--- |
--- |
--- |
1 |
main |
LOC_Os01g01140.1 |
|
15795706 |
15795706 |
chr1 |
+ |
71775 |
78938 |
29 |
AK103820 // Os01g0101600 // Os01g0101600 // --- // 4326462 /// AK122118 // Os01g0101600 // Os01g0101600 // --- // 4326462 /// NM_001048278 // Os01g0101600 // Os01g0101600 // --- // 4326462 |
LOC_Os01g01150.2 // Rice Genome Annotation Project at MSU // cDNA|RNA recognition motif, putative, expressed gene:LOC_Os01g01150 // chr1 // 100 // 100 // 3 // 3 // 0 /// LOC_Os01g01150.1 // Rice Genome Annotation Project at MSU // cDNA|RNA recognition motif, putative, expressed gene:LOC_Os01g01150 // chr1 // 109 // 109 // 12 // 11 // 0 /// LOC_Os01g01150.3 // Rice Genome Annotation Project at MSU // cDNA|RNA recognition motif, putative, expressed gene:LOC_Os01g01150 // chr1 // 100 // 100 // 3 // 3 // 0 /// BGIOSGA002581-TA // BGI Rice Genome // locus=Chr01:98744:102775:+ gene:BGIOSGA002581 // chr1 // 100 // 100 // 3 // 3 // 0 /// AK103820 // GenBank // Oryza sativa Japonica Group cDNA clone:J033147H07, full insert sequence. // chr1 // 100 // 100 // 9 // 9 // 0 /// AK122118 // GenBank // Oryza sativa Japonica Group cDNA clone:J033128C08, full insert sequence. // chr1 // 100 // 100 // 15 // 15 // 0 /// NM_001048278 // RefSeq // Oryza sativa Japonica Group Os01g0101600 (Os01g0101600) mRNA, complete cds. // chr1 // 107 // 107 // 15 // 14 // 0 /// Os01t0101600-01 // Rice Annotation Project Database // Immunoglobulin-like fold domain containing protein. // chr1 // 150 // 150 // 3 // 2 // 0 /// Os01t0101600-02 // Rice Annotation Project Database // Immunoglobulin-like fold domain containing protein. // chr1 // 100 // 100 // 3 // 3 // 0 |
BGIOSGA002581-TA // A2WJM1 /// AK103820 // Q655M5 /// AK122118 // Q655M5 /// NM_001048278 // Q655M5 |
AK103820 // Os.15960 // callus| flower| leaf| panicle| root| seed| stem /// AK122118 // Os.15960 // callus| flower| leaf| panicle| root| seed| stem /// NM_001048278 // Os.15960 // callus| flower| leaf| panicle| root| seed| stem |
LOC_Os01g01150.2 // GO:0042309 // homoiothermy // inferred from electronic annotation /// LOC_Os01g01150.2 // GO:0050826 // response to freezing // inferred from electronic annotation /// LOC_Os01g01150.1 // GO:0042309 // homoiothermy // inferred from electronic annotation /// LOC_Os01g01150.1 // GO:0050826 // response to freezing // inferred from electronic annotation /// LOC_Os01g01150.3 // GO:0042309 // homoiothermy // inferred from electronic annotation /// LOC_Os01g01150.3 // GO:0050826 // response to freezing // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0000911 // cytokinesis by cell plate formation // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0007155 // cell adhesion // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0008150 // biological_process // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0009887 // organ morphogenesis // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0009888 // tissue development // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0010090 // trichome morphogenesis // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0010228 // vegetative to reproductive phase transition of meristem // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0010638 // positive regulation of organelle organization // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0016926 // protein desumoylation // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0033044 // regulation of chromosome organization // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0045010 // actin nucleation // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation |
--- |
LOC_Os01g01150.2 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// LOC_Os01g01150.2 // GO:0050825 // ice binding // inferred from electronic annotation /// LOC_Os01g01150.1 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// LOC_Os01g01150.1 // GO:0050825 // ice binding // inferred from electronic annotation /// LOC_Os01g01150.3 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// LOC_Os01g01150.3 // GO:0050825 // ice binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0000166 // nucleotide binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0005515 // protein binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0003723 // RNA binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0046872 // metal ion binding // inferred from electronic annotation /// BGIOSGA002581-TA // GO:0008270 // zinc ion binding // inferred from electronic annotation /// AK103820 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// AK103820 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// AK103820 // GO:0003723 // RNA binding // inferred from electronic annotation /// AK103820 // GO:0046872 // metal ion binding // inferred from electronic annotation /// AK122118 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// AK122118 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// AK122118 // GO:0003723 // RNA binding // inferred from electronic annotation /// AK122118 // GO:0046872 // metal ion binding // inferred from electronic annotation /// NM_001048278 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// NM_001048278 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// NM_001048278 // GO:0003723 // RNA binding // inferred from electronic annotation /// NM_001048278 // GO:0046872 // metal ion binding // inferred from electronic annotation |
--- |
LOC_Os01g01150.3 // Pfam // IPR000504 // RNA recognition motif domain /// LOC_Os01g01150.3 // Pfam // IPR017868 // Filamin/ABP280 repeat-like /// BGIOSGA002581-TA // Pfam // IPR000504 // RNA recognition motif domain /// BGIOSGA002581-TA // Pfam // IPR017868 // Filamin/ABP280 repeat-like |
1 |
main |
LOC_Os01g01150.2 |
|
15795717 |
15795717 |
chr1 |
+ |
81428 |
83302 |
21 |
NM_001048279 // Os01g0101700 // Os01g0101700 // --- // 4326463 |
LOC_Os01g01160.1 // Rice Genome Annotation Project at MSU // cDNA|heat shock protein DnaJ, putative, expressed gene:LOC_Os01g01160 // chr1 // 150 // 150 // 12 // 8 // 0 /// NM_001048279 // RefSeq // Oryza sativa Japonica Group Os01g0101700 (Os01g0101700) mRNA, complete cds. // chr1 // 92 // 92 // 11 // 12 // 0 /// Os01t0101700-00 // Rice Annotation Project Database // Similar to chaperone protein dnaJ 20. // chr1 // 83 // 83 // 5 // 6 // 0 |
NM_001048279 // Q0JRH0 |
NM_001048279 // Os.5648 // flower| panicle| stem |
--- |
--- |
LOC_Os01g01160.1 // GO:0031072 // heat shock protein binding // inferred from electronic annotation |
--- |
LOC_Os01g01160.1 // Pfam // IPR001623 // DnaJ domain |
1 |
main |
LOC_Os01g01160.1 |
|
15795722 |
15795722 |
chr1 |
+ |
84337 |
87844 |
21 |
AK103498 // Os01g0101800 // Os01g0101800 // --- // 4326464 |
BGIOSGA002583-TA // BGI Rice Genome // locus=Chr01:111146:114350:+ gene:BGIOSGA002583 // chr1 // 300 // 300 // 3 // 1 // 0 /// AK103498 // GenBank // Oryza sativa Japonica Group cDNA clone:J033131A17, full insert sequence. // chr1 // 300 // 300 // 3 // 1 // 0 /// Os01t0101800-01 // Rice Annotation Project Database // Conserved hypothetical protein. // chr1 // 100 // 100 // 5 // 5 // 0 |
BGIOSGA002583-TA // B8ACS0 |
AK103498 // Os.32622 // callus| panicle |
BGIOSGA002583-TA // GO:0006260 // DNA replication // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0006270 // DNA replication initiation // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0006275 // regulation of DNA replication // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0006306 // DNA methylation // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0008150 // biological_process // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0008283 // cell proliferation // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0051567 // histone H3-K9 methylation // inferred from electronic annotation /// BGIOSGA002583-TA // GO:0051726 // regulation of cell cycle // inferred from electronic annotation |
--- |
BGIOSGA002583-TA // GO:0003674 // molecular_function // inferred from electronic annotation |
--- |
--- |
1 |
main |
BGIOSGA002583-TA |
|
15795731 |
15795731 |
chr1 |
+ |
133291 |
134685 |
22 |
AK067320 // Os01g0102300 // Os01g0102300 // --- // 4326466 |
LOC_Os01g01280.1 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01280 // chr1 // 143 // 143 // 10 // 7 // 0 /// AK067320 // GenBank // Oryza sativa Japonica Group cDNA clone:J013106P10, full insert sequence. // chr1 // 250 // 250 // 5 // 2 // 0 |
--- |
AK067320 // Os.60480 // callus| leaf| panicle| root| stem |
--- |
--- |
--- |
--- |
--- |
1 |
main |
LOC_Os01g01280.1 |
|
15795737 |
15795737 |
chr1 |
+ |
138820 |
140588 |
9 |
NM_001048283 // Os01g0102400 // Os01g0102400 // --- // 4326467 |
LOC_Os01g01290.1 // Rice Genome Annotation Project at MSU // cDNA|histone-like transcription factor and archaeal histone, putative, expressed gene:LOC_Os01g01290 // chr1 // 100 // 100 // 7 // 7 // 0 /// NM_001048283 // RefSeq // Oryza sativa Japonica Group Os01g0102400 (Os01g0102400) mRNA, complete cds. // chr1 // 43 // 43 // 3 // 7 // 0 |
NM_001048283 // Q93VF0 |
NM_001048283 // Os.48026 // flower |
NM_001048283 // GO:0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation |
LOC_Os01g01290.1 // GO:0005622 // intracellular // inferred from electronic annotation /// NM_001048283 // GO:0005622 // intracellular // inferred from electronic annotation /// NM_001048283 // GO:0005634 // nucleus // inferred from electronic annotation /// NM_001048283 // GO:0016602 // CCAAT-binding factor complex // inferred from electronic annotation |
LOC_Os01g01290.1 // GO:0003677 // DNA binding // inferred from electronic annotation /// LOC_Os01g01290.1 // GO:0043565 // sequence-specific DNA binding // inferred from electronic annotation /// NM_001048283 // GO:0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// NM_001048283 // GO:0043565 // sequence-specific DNA binding // inferred from electronic annotation /// NM_001048283 // GO:0046982 // protein heterodimerization activity // inferred from electronic annotation |
--- |
LOC_Os01g01290.1 // Pfam // IPR003958 // Transcription factor CBF/NF-Y/archaeal histone |
1 |
main |
LOC_Os01g01290.1 |
|
15795740 |
15795740 |
chr1 |
+ |
140936 |
143554 |
21 |
NM_001048284 // Os01g0102500 // Os01g0102500 // --- // 4326468 |
LOC_Os01g01295.1 // Rice Genome Annotation Project at MSU // cDNA|expressed protein gene:LOC_Os01g01295 // chr1 // 167 // 167 // 10 // 6 // 0 /// NM_001048284 // RefSeq // Oryza sativa Japonica Group Os01g0102500 (Os01g0102500) mRNA, complete cds. // chr1 // 167 // 167 // 10 // 6 // 0 /// Os01t0102500-01 // Rice Annotation Project Database // Conserved hypothetical protein. // chr1 // 167 // 167 // 10 // 6 // 0 |
LOC_Os01g01295.1 // B8ACS1 /// LOC_Os01g01295.1 // Q93VY8 /// NM_001048284 // Q93VY8 |
NM_001048284 // Os.13236 // callus| leaf| panicle| root| stem |
--- |
--- |
--- |
--- |
--- |
1 |
main |
LOC_Os01g01295.1 |
|
15795746 |
15795746 |
chr1 |
+ |
144577 |
146852 |
28 |
AK064812 // Os01g0102600 // Os01g0102600 // --- // 4326439 |
LOC_Os01g01302.1 // Rice Genome Annotation Project at MSU // cDNA|shikimate kinase, putative, expressed gene:LOC_Os01g01302 // chr1 // 100 // 100 // 3 // 3 // 0 /// AK064812 // GenBank // Oryza sativa Japonica Group cDNA clone:J013000E05, full insert sequence. // chr1 // 120 // 120 // 6 // 5 // 0 /// Os01t0102600-01 // Rice Annotation Project Database // Shikimate kinase domain containing protein. // chr1 // 150 // 150 // 3 // 2 // 0 |
LOC_Os01g01302.1 // B8ACS2 /// LOC_Os01g01302.1 // Q0JRG4 /// LOC_Os01g01302.1 // Q655K8 /// AK064812 // Q0JRG4 |
AK064812 // Os.9865 // callus| flower| leaf| panicle| stem |
LOC_Os01g01302.1 // GO:0000096 // sulfur amino acid metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006546 // glycine catabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006569 // tryptophan catabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006636 // unsaturated fatty acid biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006733 // oxidoreduction coenzyme metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0006766 // vitamin metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009106 // lipoate metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009108 // coenzyme biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009117 // nucleotide metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009658 // chloroplast organization // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009684 // indoleacetic acid biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009695 // jasmonic acid biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0009965 // leaf morphogenesis // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0010027 // thylakoid membrane organization // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0019288 // isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0019344 // cysteine biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0019748 // secondary metabolic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0030154 // cell differentiation // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0044272 // sulfur compound biosynthetic process // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// AK064812 // GO:0000096 // sulfur amino acid metabolic process // inferred from electronic annotation /// AK064812 // GO:0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// AK064812 // GO:0006546 // glycine catabolic process // inferred from electronic annotation /// AK064812 // GO:0006569 // tryptophan catabolic process // inferred from electronic annotation /// AK064812 // GO:0006636 // unsaturated fatty acid biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0006733 // oxidoreduction coenzyme metabolic process // inferred from electronic annotation /// AK064812 // GO:0006766 // vitamin metabolic process // inferred from electronic annotation /// AK064812 // GO:0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// AK064812 // GO:0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0009106 // lipoate metabolic process // inferred from electronic annotation /// AK064812 // GO:0009108 // coenzyme biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0009117 // nucleotide metabolic process // inferred from electronic annotation /// AK064812 // GO:0009658 // chloroplast organization // inferred from electronic annotation /// AK064812 // GO:0009684 // indoleacetic acid biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0009695 // jasmonic acid biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0009965 // leaf morphogenesis // inferred from electronic annotation /// AK064812 // GO:0010027 // thylakoid membrane organization // inferred from electronic annotation /// AK064812 // GO:0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// AK064812 // GO:0019288 // isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway // inferred from electronic annotation /// AK064812 // GO:0019344 // cysteine biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0019748 // secondary metabolic process // inferred from electronic annotation /// AK064812 // GO:0030154 // cell differentiation // inferred from electronic annotation /// AK064812 // GO:0044272 // sulfur compound biosynthetic process // inferred from electronic annotation /// AK064812 // GO:0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation |
LOC_Os01g01302.1 // GO:0009570 // chloroplast stroma // inferred from electronic annotation /// AK064812 // GO:0009536 // plastid // inferred from reviewed computational analysis /// AK064812 // GO:0009570 // chloroplast stroma // inferred from electronic annotation |
LOC_Os01g01302.1 // GO:0004765 // shikimate kinase activity // inferred from electronic annotation /// LOC_Os01g01302.1 // GO:0005524 // ATP binding // inferred from electronic annotation /// AK064812 // GO:0004765 // shikimate kinase activity // inferred from electronic annotation /// AK064812 // GO:0005524 // ATP binding // inferred from electronic annotation |
--- |
LOC_Os01g01302.1 // Pfam // IPR000623 // Shikimate kinase/Threonine synthase-like 1 |
1 |
main |
LOC_Os01g01302.1 |
|
15795758 |
15795758 |
chr1 |
+ |
147085 |
149568 |
18 |
AK063774 // Os01g0102700 // Os01g0102700 // --- // 4326440 /// AK099081 // Os01g0102700 // Os01g0102700 // --- // 4326440 /// AK099360 // Os01g0102700 // Os01g0102700 // --- // 4326440 /// NM_001048286 // Os01g0102700 // Os01g0102700 // --- // 4326440 |
LOC_Os01g01307.1 // Rice Genome Annotation Project at MSU // cDNA|translocon-associated protein beta domain containing protein, expressed gene:LOC_Os01g01307 // chr1 // 100 // 100 // 18 // 18 // 0 /// AK063774 // GenBank // Oryza sativa Japonica Group cDNA clone:001-121-C11, full insert sequence. // chr1 // 100 // 100 // 18 // 18 // 0 /// AK099081 // GenBank // Oryza sativa Japonica Group cDNA clone:J023002L13, full insert sequence. // chr1 // 94 // 94 // 17 // 18 // 0 /// AK099360 // GenBank // Oryza sativa Japonica Group cDNA clone:J033046F10, full insert sequence. // chr1 // 94 // 94 // 17 // 18 // 0 /// NM_001048286 // RefSeq // Oryza sativa Japonica Group Os01g0102700 (Os01g0102700) mRNA, complete cds. // chr1 // 100 // 100 // 18 // 18 // 0 |
LOC_Os01g01307.1 // B7ENG6 /// LOC_Os01g01307.1 // Q655K7 /// LOC_Os01g01307.1 // Q7F2E5 /// AK063774 // B7ENG6 /// AK099081 // B7ENG6 /// AK099360 // B7ENG6 /// NM_001048286 // B7ENG6 /// NM_001048286 // Q0JRG3 |
AK063774 // Os.10818 // callus| flower| leaf| panicle| root| seed| stem /// AK099081 // Os.10818 // callus| flower| leaf| panicle| root| seed| stem /// AK099360 // Os.10818 // callus| flower| leaf| panicle| root| seed| stem /// NM_001048286 // Os.10818 // callus| flower| leaf| panicle| root| seed| stem |
--- |
LOC_Os01g01307.1 // GO:0005886 // plasma membrane // inferred from electronic annotation /// LOC_Os01g01307.1 // GO:0016021 // integral to membrane // inferred from electronic annotation /// LOC_Os01g01307.1 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK063774 // GO:0016023 // cytoplasmic membrane-bounded vesicle // inferred from reviewed computational analysis /// AK063774 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK063774 // GO:0005886 // plasma membrane // inferred from electronic annotation /// AK063774 // GO:0016021 // integral to membrane // inferred from electronic annotation /// AK099081 // GO:0016023 // cytoplasmic membrane-bounded vesicle // inferred from reviewed computational analysis /// AK099081 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK099081 // GO:0005886 // plasma membrane // inferred from electronic annotation /// AK099081 // GO:0016021 // integral to membrane // inferred from electronic annotation /// AK099360 // GO:0016023 // cytoplasmic membrane-bounded vesicle // inferred from reviewed computational analysis /// AK099360 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// AK099360 // GO:0005886 // plasma membrane // inferred from electronic annotation /// AK099360 // GO:0016021 // integral to membrane // inferred from electronic annotation /// NM_001048286 // GO:0016023 // cytoplasmic membrane-bounded vesicle // inferred from reviewed computational analysis /// NM_001048286 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// NM_001048286 // GO:0005886 // plasma membrane // inferred from electronic annotation /// NM_001048286 // GO:0016021 // integral to membrane // inferred from electronic annotation |
--- |
--- |
LOC_Os01g01307.1 // Pfam // IPR008856 // Translocon-associated protein subunit beta |
1 |
main |
LOC_Os01g01307.1 |
|