NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL23566 Query DataSets for GPL23566
Status Public on Aug 25, 2017
Title PROSTVAC a96 ver. 2
Technology type spotted peptide or protein
Distribution non-commercial
Organisms Quercus alba; Gossypium hirsutum; Rhodotorula; Trypanosoma cruzi; Pandalus borealis; Oncorhynchus nerka; Gallus gallus; Homo sapiens; Sus scrofa domesticus; Bos taurus; Ovis aries; Oryctolagus cuniculus; Mus musculus; Human immunodeficiency virus 1; Ceratonia siliqua; Megathura crenulata; Bothrops moojeni; Frangula alnus; Senegalia senegal; Pachymenia carnosa; Dermestes lardarius
Manufacturer National Cancer Institute, Chemical Glycobiology Section
Manufacture protocol Glycoproteins and neoglycoproteins spotted onto epoxide functionalized glass slides (ArrayIt SME2) using a MicroGrid II arrayer.
Support Glass
Coating Epoxide
 
Description Each slide contains 16 identical array containing 96 components printed in duplicate (192 features total)
spotted glycoproteins and neoglycoproteins
 
Citation(s) 22057524
Submission date Jun 09, 2017
Last update date Jun 23, 2017
Contact name Jeff Gildersleeve
Organization name National Cancer Institute
Street address 376 Boyles St.
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Samples (49) GSM2656563, GSM2656564, GSM2656565, GSM2656566, GSM2656567, GSM2656568 
Series (7)
GSE99873 Therapeutic antibodies to ganglioside GD2 evolved from highly selective germline antibodies II
GSE99874 Therapeutic antibodies to ganglioside GD2 evolved from highly selective germline antibodies III
GSE100307 Therapeutic antibodies to ganglioside GD2 evolved from highly selective germline antibodies IV

Data table header descriptions
ID
SPOT_ID
Description
Family
LINKER
CORE
SUGAR_RATIO
ORGANISM
NOTES

Data table
ID SPOT_ID Description Family LINKER CORE SUGAR_RATIO ORGANISM NOTES
1 Cy3 "Cy3-BSA (20mg/mL + BSA, 125mg/mL total)" z-control na BSA null
2 BSA Bovine serum albumin z-control na BSA na Bos taurus
3 Maltose - 23 Glca1-4Glcb-BSA carb-Glc MEAG BSA 23 Homo sapien
4 Glc-b - 23 Glc-b - BSA carb-Glc MEAG BSA 23 Homo sapien
5 GalNAc-a - 22 GalNAc-a - BSA carb-GalNAc MEAG BSA 22 Homo sapien
6 Glc-a - 22 Glc-a - BSA carb-Glc MEAG BSA 22 Homo sapien
7 Man-a - 20 Man-a - BSA carb-Man MEAG BSA 20 Homo sapien
8 GlcNAc-b -21 GlcNAc-b - BSA carb-GlcNAc MEAG BSA 21 Homo sapien
9 GalNAc-b - 21 GalNAc-b - BSA carb-GalNAc MEAG BSA 21 Homo sapien
10 Fuc-b - 22 Fuc-b - BSA non-human MEAG BSA 22 bos taurus
11 Fuc-a - 22 Fuc-a - BSA carb-Fuc MEAG BSA 22 Homo sapien
12 Rha-a - 18 Rha-a – BSA non-human MEAG BSA 18 Rhamnus frangula
13 Rha-b - 21 Rha-b - BSA non-human MEAG BSA 21 Rhamnus frangula
14 Gal-a- 24 Gal-a - BSA carb-Gal MEAG BSA 24 Homo sapien
15 Gal-b- 21 Gal-b - BSA carb-Gal MEAG BSA 21 Homo sapien
16 Ac-Tn(Thr)-G - 21 Ac(GalNAca)Thr-Gly-Hex-BSA peptide-Tn hex BSA 21 Homo sapien
17 GalNAca1-6Galb - 22 GalNAca1-6Galb-BSA carb-GalNAc MEAG BSA 22 Homo sapien
18 Adi - 17 GalNAca1-3Galb-BSA Blood Group A MEAG BSA 17 Homo sapien
19 GlcNAca1-4Galb - 20 GlcNAca1-4Galb-BSA carb-GlcNAc MEAG BSA 20 Homo sapien
20 Bdi -23 Gala1-3Gal– BSA non-human-aGal 14 atom spacer BSA 23 Mus musculus

Total number of rows: 500

Table truncated, full table size 46 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap