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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 01, 2008 |
| Title |
HG17_Human_60mer_1in2 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Roche NimbleGen |
| Manufacture protocol |
See Roche NimbleGen website
|
| Catalog number |
2005-04-20_Human_60mer_1in2; design ID: 1877 |
| |
|
| |
|
| Contributor(s) |
Figueroa ME, Melnick AM, Greally JM |
| Submission date |
Mar 18, 2008 |
| Last update date |
Oct 27, 2010 |
| Contact name |
Maria Eugenia Figueroa |
| E-mail(s) |
mef162@miami.edu
|
| Organization name |
University of Miiami
|
| Department |
Human Genetics
|
| Lab |
Maria Figueroa
|
| Street address |
1501 NW 10th Ave, BRB 709A, Locator code C227
|
| City |
Miami |
| State/province |
FL |
| ZIP/Postal code |
33136 |
| Country |
USA |
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| Samples (504)
|
GSM276239, GSM276240, GSM276305, GSM276370, GSM276371, GSM276372
GSM276373, GSM276374, GSM276375, GSM276376, GSM306250, GSM306252, GSM344449, GSM344450, GSM344451, GSM344452, GSM344453, GSM344454, GSM344455, GSM344456, GSM344457, GSM344458, GSM344459, GSM344460, GSM344461, GSM344462, GSM344463, GSM344464, GSM344465, GSM344466, GSM344467, GSM344468, GSM344470, GSM344471, GSM344472, GSM344473, GSM344474, GSM344475, GSM344476, GSM344477, GSM344586, GSM344587, GSM344600, GSM344601, GSM344626, GSM503908, GSM503909, GSM503910, GSM503911, GSM503912, GSM503913, GSM503914, GSM503915, GSM596058, GSM596059, GSM596060, GSM596061, GSM596062, GSM596063, GSM596064, GSM596065, GSM596066, GSM596067, GSM596068, GSM596069, GSM596070, GSM596071, GSM603621, GSM603622, GSM603623, GSM603624, GSM603625, GSM603626, GSM603627, GSM603628, GSM603629, GSM603630, GSM603631, GSM603632, GSM603633, GSM603634, GSM603635, GSM603636, GSM603637, GSM603638, GSM603639, GSM603640, GSM603641, GSM603642, GSM603643, GSM603644, GSM603645, GSM603646, GSM603647, GSM603648, GSM603649, GSM603650, GSM603651, GSM603652, GSM603653, GSM603654, GSM603655, GSM603656, GSM603657, GSM603658, GSM603659, GSM603660, GSM603661, GSM603662, GSM603663, GSM603664, GSM603665, GSM603666, GSM603667, GSM603668, GSM603669, GSM603670, GSM603671, GSM603672, GSM603673, GSM603674, GSM603675, GSM603676, GSM603677, GSM603678, GSM603679, GSM603680, GSM603681, GSM603682, GSM603683, GSM603684, GSM603685, GSM603686, GSM603687, GSM603688, GSM603689, GSM603690, GSM603691, GSM603692, GSM603693, GSM603694, GSM603695, GSM603696, GSM603697, GSM603698, GSM603699, GSM603700, GSM603701, GSM603702, GSM603703, GSM603704, GSM603705, GSM603706, GSM603707, GSM603708, GSM603709, GSM603710, GSM603711, GSM603712, GSM603713, GSM603714, GSM603715, GSM603716, GSM603717, GSM603718, GSM603719, GSM603720, GSM603721, GSM603722, GSM603723, GSM603724, GSM603725, GSM603726, GSM603727, GSM603728, GSM603729, GSM603730, GSM603731, GSM603732, GSM603733, GSM603734, GSM603735, GSM603736, GSM603737, GSM603738, GSM603739, GSM603740, GSM603741, GSM603742, GSM603743, GSM603744, GSM603745, GSM603746, GSM603747, GSM603748, GSM603749, GSM603750, GSM603751, GSM603752, GSM603753, GSM603754, GSM603755, GSM603756, GSM603757, GSM603758, GSM603759, GSM603760, GSM603761, GSM603762, GSM603763, GSM603764, GSM603765, GSM603766, GSM603767, GSM603768, GSM603769, GSM603770, GSM603771, GSM603772, GSM603773, GSM603774, GSM603775, GSM603776, GSM603777, GSM603778, GSM603779, GSM603780, GSM603781, GSM603782, GSM603783, GSM603784, GSM603785, GSM603786, GSM603787, GSM603788, GSM603789, GSM603790, GSM603791, GSM603792, GSM603793, GSM603794, GSM603795, GSM603796, GSM603797, GSM603798, GSM603799, GSM603800, GSM603801, GSM603802, GSM603803, GSM603804, GSM603805, GSM603806, GSM603807, GSM603808, GSM603809, GSM603810, GSM603811, GSM603812, GSM603813, GSM603814, GSM603815, GSM603816, GSM603817, GSM603818, GSM603819, GSM603820, GSM603821, GSM603822, GSM603823, GSM603824, GSM603825, GSM603826, GSM603827, GSM603828, GSM603829, GSM603830, GSM603831, GSM603832, GSM603833, GSM603834, GSM603835, GSM603836, GSM603837, GSM603838, GSM603839, GSM603840, GSM603841, GSM603842, GSM603843, GSM603844, GSM603845, GSM603846, GSM603847, GSM603848, GSM603849, GSM603850, GSM603851, GSM603852, GSM603853, GSM603854, GSM603855, GSM603856, GSM603857, GSM603858, GSM603859, GSM603860, GSM603861, GSM603862, GSM603863, GSM603864, GSM603865, GSM603866, GSM603867, GSM603868, GSM603869, GSM603870, GSM603871, GSM603872, GSM603873, GSM603874, GSM603875, GSM603876, GSM603877, GSM603878, GSM603879, GSM603880, GSM603881, GSM603882, GSM603883, GSM603884, GSM603885, GSM603886, GSM603887, GSM603888, GSM603889, GSM603890, GSM603891, GSM603892, GSM603893, GSM603894, GSM603895, GSM603896, GSM603897, GSM603898, GSM603899, GSM603900, GSM603901, GSM603902, GSM603903, GSM603904, GSM603905, GSM603906, GSM603907, GSM603908, GSM603909, GSM603910, GSM603911, GSM603912, GSM603913, GSM603914, GSM603915, GSM603916, GSM603917, GSM603918, GSM603919, GSM603920, GSM603921, GSM603922, GSM603923, GSM603924, GSM603925, GSM603926, GSM603927, GSM603928, GSM603929, GSM603930, GSM603931, GSM603932, GSM603933, GSM603934, GSM603935, GSM603936, GSM603937, GSM603938, GSM603939, GSM603940, GSM603941, GSM603942, GSM603943, GSM603944, GSM603945, GSM603946, GSM603947, GSM603948, GSM603949, GSM603950, GSM603951, GSM603952, GSM603953, GSM603954, GSM603955, GSM603956, GSM603957, GSM603958, GSM603959, GSM603960, GSM603961, GSM603962, GSM603963, GSM603964, GSM603965, GSM603966, GSM603967, GSM603968, GSM603969, GSM603970, GSM603971, GSM603972, GSM603973, GSM603974, GSM603975, GSM603976, GSM603977, GSM603978, GSM603979, GSM603980, GSM603981, GSM603982, GSM603983, GSM637810, GSM637811, GSM637812, GSM637813, GSM637814, GSM637815, GSM637816, GSM637817, GSM637818, GSM637819, GSM637820, GSM637821, GSM637822, GSM637823, GSM637824, GSM637825, GSM637826, GSM637827, GSM637828, GSM637829, GSM637830, GSM637831, GSM637832, GSM637833, GSM637834, GSM637835, GSM637836, GSM637837, GSM712165, GSM712166, GSM712167, GSM712168, GSM712169, GSM712170, GSM712171, GSM712172, GSM712173, GSM712174, GSM712175, GSM712176, GSM712177, GSM712178, GSM712179, GSM712180, GSM712181, GSM712182, GSM712183, GSM712184, GSM712185, GSM712186, GSM712187, GSM712188, GSM712189, GSM712190, GSM712191, GSM712192, GSM712193, GSM712194, GSM821412, GSM821413, GSM821414, GSM821415, GSM821416, GSM821417, GSM821418, GSM821419, GSM821420, GSM821421, GSM821422, GSM821423...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
|
| Series (11)
|
| GSE10899 |
Gene expression for Integrative epigenomic study in leukemia samples |
| GSE12096 |
A methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment |
| GSE13706 |
Genome-Wide Screen of Promoter Methylation Identifies Novel Markers for Tumor Development in Melanoma |
| GSE20045 |
A mesoderm-derived mesenchymal stem/stromal cells (MSC) precursor: time course experiment |
| GSE20047 |
A mesoderm-derived mesenchymal stem/stromal cells (MSC) precursor |
| GSE24236 |
BCL6 repression of EP300 provides a basis for rational combinatorial therapy in diffuse large B cell lymphomas. |
| GSE24505 |
Leukemic IDH1 and IDH2 mutations result in a hypermethylation phenotype, disrupt TET2 function, and impair hematopoietic differentiation |
| GSE25973 |
FGF2 sustains NANOG and switches the outcome of BMP4 induced human embryonic stem cell differentiation |
| GSE28744 |
Chemosensitization of DLBCL cells in vitro and in vivo by demethylating nucleoside analogues [gene expression] |
| GSE31104 |
Chemosensitization of DLBCL cells in vitro and in vivo by demethylating nucleoside analogues |
| GSE33180 |
Protein Kinase C Mediated Extraembryonic Endoderm Differentiation of Human Embryonic Stem Cells |
|
| Data table header descriptions |
| ID |
|
| BUILD |
Genome build April 2006 |
| GB_ACC |
Accession number |
| CHROM |
Chromosome number |
| RANGE_GB |
Build Accession Version |
| RANGE_STRAND |
Chromosome strand |
| RANGE_START |
Transcription start site |
| RANGE_END |
Transcription end site |
| EXONCOUNT |
Number of exons in transcript |
| EXONSTARTS |
Positions where exons begin |
| EXONENDS |
Positions where exons end |
| PROTEINID |
Protein Identifier |
| DESCRIPTION |
Gene description |
| Data table |
| ID |
BUILD |
GB_ACC |
CHROM |
RANGE_GB |
RANGE_STRAND |
RANGE_START |
RANGE_END |
EXONCOUNT |
EXONSTARTS |
EXONENDS |
PROTEINID |
DESCRIPTION |
| HSAP0406S00000001 |
april 06 |
BC015400 |
chr1 |
NC_000001.8 |
- |
4268 |
5808 |
3 |
4268,4832,5658, |
4692,4901,5808, |
Q96BN3 |
CDS; MGC52000; MGC52000 protein; Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:4156973), partial cds. |
| HSAP0406S00000002 |
april 06 |
AY217347 |
chr1 |
NC_000001.8 |
- |
4271 |
9622 |
11 |
4271,4832,5658,6469,6600,6719,7095,7468,7777,8130,8775, |
4692,4901,5810,6590,6631,6918,7231,7605,7924,8242,9622, |
Q86WN0 |
CDS; N/A; unknown; Homo sapiens unknown mRNA. |
| HSAP0406S00000003 |
april 06 |
AK024481 |
chr1 |
NC_000001.8 |
- |
4269 |
8596 |
2 |
4269,6720, |
6628,8596, |
Q9H7J9 |
CDS; FLJ00075; FLJ00075 protein; Homo sapiens mRNA for FLJ00075 protein, partial cds. |
| HSAP0406S00000004 |
april 06 |
NM_198943 |
chr1 |
NC_000001.8 |
- |
4268 |
14754 |
10 |
4268,4832,5658,6469,6719,7095,7468,7777,8130,14600, |
4692,4901,5810,6631,6918,7231,7605,7924,8242,14754, |
|
CDS; MGC52000; CXYorf1-related protein; Homo sapiens CXYorf1-related protein (MGC52000), mRNA. |
| HSAP0406S00000005 |
april 06 |
AK024448 |
chr1 |
NC_000001.8 |
- |
10369 |
19200 |
2 |
10369,19183, |
14754,19200, |
Q9H7N0 |
CDS; FLJ00038; FLJ00038 protein; Homo sapiens mRNA for FLJ00038 protein, partial cds. |
| HSAP0406S00000006 |
april 06 |
AL137714 |
chr1 |
NC_000001.8 |
- |
4266 |
19346 |
8 |
4266,4832,6720,7095,7777,8130,14600,19183, |
4692,6628,6918,7605,7924,8229,14754,19346, |
Q9NSV7 |
CDS; DKFZp434K1323; hypothetical protein; Homo sapiens mRNA; cDNA DKFZp434K1323 (from clone DKFZp434K1323). |
| HSAP0406S00000007 |
april 06 |
BX537637 |
chr1 |
NC_000001.8 |
- |
4268 |
19672 |
12 |
4268,4427,4867,5658,6469,6720,7095,7468,7777,8130,14600,19396, |
4363,4434,4901,5810,6628,6918,7231,7605,7924,8229,14754,19672, |
Q7Z3N4 |
CDS; DKFZp686C24272; hypothetical protein; Homo sapiens mRNA; cDNA DKFZp686C24272 (from clone DKFZp686C24272). |
| HSAP0406S00000008 |
april 06 |
AF346307 |
chr1 |
NC_000001.8 |
- |
24416 |
25944 |
3 |
24416,25139,25583, |
25037,25344,25944, |
Q8NG00 |
CDS; F379; hypothetical protein; Homo sapiens hypothetical protein (F379) mRNA, complete cds. |
| HSAP0406S00000009 |
april 06 |
NM_001005484 |
chr1 |
NC_000001.8 |
+ |
58953 |
59871 |
1 |
58953, |
59871, |
|
CDS; OR4F5; olfactory receptor, family 4, subfamily F, member 5; Homo sapiens olfactory receptor, family 4, subfamily F, member 5 (OR4F5), mRNA. |
| HSAP0406S00000010 |
april 06 |
AK128780 |
chr1 |
NC_000001.8 |
- |
124776 |
129322 |
3 |
124776,127240,129109, |
126020,127929,129322, |
BAC87609 |
CDS; N/A; N/A; Homo sapiens cDNA FLJ45445 fis, clone BRSSN2013696. |
| HSAP0406S00000011 |
april 06 |
BC031359 |
chr1 |
NC_000001.8 |
- |
225978 |
227297 |
1 |
225978, |
227297, |
Q8N5W6 |
CDS; N/A; Unknown (protein for IMAGE:4778855); Homo sapiens, clone IMAGE:4778855, mRNA, partial cds. |
| HSAP0406S00000012 |
april 06 |
AK128780 |
chr1 |
NC_000001.8 |
+ |
364535 |
368303 |
3 |
364535,365928,367059, |
364748,366620,368303, |
BAC87609 |
CDS; N/A; N/A; Homo sapiens cDNA FLJ45445 fis, clone BRSSN2013696. |
| HSAP0406S00000013 |
april 06 |
NM_001005277 |
chr1 |
NC_000001.8 |
+ |
407521 |
408460 |
1 |
407521, |
408460, |
|
CDS; OR4F16; olfactory receptor, family 4, subfamily F, member 16; Homo sapiens olfactory receptor, family 4, subfamily F, member 16 (OR4F16), mRNA. |
| HSAP0406S00000014 |
april 06 |
BC031359 |
chr1 |
NC_000001.8 |
+ |
502134 |
503453 |
1 |
502134, |
503453, |
Q8N5W6 |
CDS; N/A; Unknown (protein for IMAGE:4778855); Homo sapiens, clone IMAGE:4778855, mRNA, partial cds. |
| HSAP0406S00000015 |
april 06 |
NM_001005277 |
chr1 |
NC_000001.8 |
- |
660958 |
661897 |
1 |
660958, |
661897, |
|
CDS; OR4F16; olfactory receptor, family 4, subfamily F, member 16; Homo sapiens olfactory receptor, family 4, subfamily F, member 16 (OR4F16), mRNA. |
| HSAP0406S00000016 |
april 06 |
AK128780 |
chr1 |
NC_000001.8 |
- |
701142 |
704813 |
3 |
701142,702728,704604, |
702386,703424,704813, |
BAC87609 |
CDS; N/A; N/A; Homo sapiens cDNA FLJ45445 fis, clone BRSSN2013696. |
| HSAP0406S00000017 |
april 06 |
NM_207464 |
chr1 |
NC_000001.8 |
+ |
792613 |
795077 |
2 |
792613,793965, |
793445,795077, |
|
CDS; FLJ40008; FLJ40008 protein; Homo sapiens FLJ40008 protein (FLJ40008), mRNA. |
| HSAP0406S00000018 |
april 06 |
BC017762 |
chr1 |
NC_000001.8 |
- |
801457 |
802765 |
1 |
801457, |
802765, |
Q9H632 |
CDS; FLJ22639; hypothetical protein FLJ22639; Homo sapiens hypothetical protein FLJ22639, mRNA (cDNA clone MGC:22172 IMAGE:4700838), complete cds. |
| HSAP0406S00000019 |
april 06 |
BC015393 |
chr1 |
NC_000001.8 |
+ |
831760 |
832491 |
1 |
831760, |
832491, |
Q96BN7 |
CDS; N/A; Unknown (protein for IMAGE:4431274); Homo sapiens, clone IMAGE:4431274, mRNA, partial cds. |
| HSAP0406S00000020 |
april 06 |
AK096928 |
chr1 |
NC_000001.8 |
- |
892817 |
896259 |
1 |
892817, |
896259, |
Q8N8E4 |
CDS; N/A; N/A; Homo sapiens cDNA FLJ39609 fis, clone SKNSH2008043. |
Total number of rows: 37364
Table truncated, full table size 12974 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL6602.ndf.gz |
21.0 Mb |
(ftp)(http) |
NDF |
| GPL6602.ngd.gz |
3.8 Mb |
(ftp)(http) |
NGD |
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