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GEO help: Mouse over screen elements for information. |
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Status |
Public on Nov 10, 2009 |
Title |
SMD Print_1529 Homo sapiens |
Technology type |
spotted DNA/cDNA |
Distribution |
non-commercial |
Organism |
Homo sapiens |
Manufacturer |
Stanford Functional Genomics Facility, Stanford School of Medicine |
Manufacture protocol |
Material is transferred from microtiter plate wells to the slide surface by an automated print head
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Support |
glass |
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Submission date |
Oct 30, 2009 |
Last update date |
Nov 10, 2009 |
Contact name |
Patrick O Brown |
E-mail(s) |
pbrown@cmgm.stanford.edu
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Organization name |
Stanford university school of medicine
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Department |
Department of biochemistry
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Street address |
Beckman Center b439
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City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305 |
Country |
USA |
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Samples (55)
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GSM466835, GSM466836, GSM466837, GSM466838, GSM466839, GSM466840
GSM466841, GSM466842, GSM466843, GSM466844, GSM466845, GSM466846, GSM466847, GSM466848, GSM466849, GSM466850, GSM466852, GSM466857, GSM466859, GSM466860, GSM466861, GSM466862, GSM466863, GSM466864, GSM466865, GSM466866, GSM466867, GSM466868, GSM466869, GSM466870, GSM466871, GSM989674, GSM989676, GSM989686, GSM989713, GSM989716, GSM989721, GSM989724, GSM989728, GSM989731, GSM989744, GSM989747, GSM989756, GSM989761, GSM989771, GSM989772, GSM989790, GSM989793, GSM989799, GSM989800, GSM989806, GSM989807, GSM989810, GSM989813, GSM989825
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Series (5)
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GSE18834 |
Human Argonaute Immunoaffinity Purification-associated RNA |
GSE18835 |
mRNA abundance in HEK293T cells mock or miR-124 transfected |
GSE18836 |
Translation Profiling +/- miR-124 |
GSE18889 |
Concordant Regulation of Translation and mRNA Abundance for Hundreds of Targets of a Human microRNA |
GSE40272 |
Gene-expression profiling of prostate tumors |
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Data table header descriptions |
ID |
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MetaColumn |
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MetaRow |
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Column |
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Row |
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Reporter Name |
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Reporter Species |
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Reporter BioSequence [gcContent] |
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Reporter BioSequence [length] |
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Reporter BioSequence [meltingTemp] |
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SEQUENCE |
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Repoter Biosequence Type |
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Repoter BioSequence PolymerType |
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Reporter Group[role] |
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Reporter ControlType |
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CompositeSequence Name |
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CompositeSequence BioSequence [ClusterId] |
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CompositeSequence BioSequence [Gene Name] |
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CompositeSequence BioSequence [Gene Symbol] |
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CompositeSequence BioSequence [GeneId] |
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CompositeSequence BioSequence [GenBank] |
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CompositeSequence Biosequence Type |
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CompositeSequence BioSequence PolymerType |
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SPOT_ID |
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Data table |
ID |
MetaColumn |
MetaRow |
Column |
Row |
Reporter Name |
Reporter Species |
Reporter BioSequence [gcContent] |
Reporter BioSequence [length] |
Reporter BioSequence [meltingTemp] |
SEQUENCE |
Repoter Biosequence Type |
Repoter BioSequence PolymerType |
Reporter Group[role] |
Reporter ControlType |
CompositeSequence Name |
CompositeSequence BioSequence [ClusterId] |
CompositeSequence BioSequence [Gene Name] |
CompositeSequence BioSequence [Gene Symbol] |
CompositeSequence BioSequence [GeneId] |
CompositeSequence BioSequence [GenBank] |
CompositeSequence Biosequence Type |
CompositeSequence BioSequence PolymerType |
SPOT_ID |
1 |
1 |
1 |
1 |
1 |
hSQ025392 |
Homo sapiens |
35.71 |
70 |
72 |
GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC |
ss_oligo |
DNA |
Control |
control_positive |
60 |
Hs.520640 |
Actin, beta |
ACTB |
60 |
60 |
gene |
DNA |
CONTROL |
30 |
1 |
1 |
1 |
2 |
hSQ010940 |
Homo sapiens |
51.43 |
70 |
79 |
ATTGTTCCCACTTGCACCTCTCCACCTTTGGCACTAGAACTCCTGAGACACCACTTCTCATGCTTCTCCC |
ss_oligo |
DNA |
Experimental |
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5326 |
Hs.154104 |
pleiomorphic adenoma gene-like 2 |
PLAGL2 |
5326 |
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gene |
DNA |
PLAGL2 |
59 |
1 |
1 |
1 |
3 |
hSQ044800 |
Homo sapiens |
47.14 |
70 |
77 |
TTTATTTTGCTAGGGAGGTAGTCAGTGGCGCACAAAGGGTAACAAGCAGTGATAGTGGGGATGCTTTCCA |
ss_oligo |
DNA |
Experimental |
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51545 |
|
zinc finger protein 581 |
ZNF581 |
51545 |
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gene |
DNA |
ZNF581 |
88 |
1 |
1 |
1 |
4 |
hSQ025662 |
Homo sapiens |
41.43 |
70 |
75 |
GCAATGATGTGAATCTCTCACTGAATTCAACCTTGAAGTGCGAATCCATGAGCTTTTTAACCCTGAGCAA |
ss_oligo |
DNA |
Experimental |
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26815 |
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X97584 |
26815 |
X97584 |
gene |
DNA |
X97584 |
117 |
1 |
1 |
1 |
5 |
hSQ020437 |
Homo sapiens |
35.71 |
70 |
72 |
CTGATGTCTATTTTATTCTACATAAGAGCCATATGTAATGTACTGTAACAAAGGAGCTTCTTGTCCCCTT |
ss_oligo |
DNA |
Experimental |
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8898 |
Hs.181326 |
Myotubularin related protein 2 |
MTMR2 |
8898 |
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gene |
DNA |
MTMR2 |
146 |
1 |
1 |
1 |
6 |
hSQ043160 |
Homo sapiens |
40.00 |
70 |
74 |
TTCACAGTCCACAGGGTTCAAATGACTTGGGTAACAGAAGTTATTCTTAGCTTACCTGTTATGTGACAGT |
ss_oligo |
DNA |
Experimental |
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9615 |
Hs.494163 |
guanine deaminase |
GDA |
9615 |
NM_004293 |
gene |
DNA |
GDA |
175 |
1 |
1 |
1 |
7 |
hSQ004718 |
Homo sapiens |
50.00 |
70 |
78 |
ACGCAGGAAGAGTGCTTAGGAGTAACTTGTTTCTAACACCTGTGTGCTGAGTGCCAATGCTGGGTGTGGT |
ss_oligo |
DNA |
Experimental |
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219743 |
Hs.533655 |
trypsin domain containing 1 |
TYSND1 |
219743 |
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gene |
DNA |
TYSND1 |
204 |
1 |
1 |
1 |
8 |
hSQ032051 |
Homo sapiens |
28.57 |
70 |
69 |
GTAATAATGAATTGTTTAAAAAACAGCTCATAATTGATGCCAAATTAAAGCACTGTGTACCCATTAAGAT |
ss_oligo |
DNA |
Experimental |
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1349 |
Hs.522699 |
Cytochrome c oxidase subunit VIIb |
COX7B |
1349 |
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gene |
DNA |
COX7B |
233 |
1 |
1 |
1 |
9 |
hSQ021814 |
Homo sapiens |
32.86 |
70 |
71 |
CTTGCCAAAAAGGTTTTGGTTATGAAAGTGAATGTTATATATTTAATATTAAGTGAACCTCCCGTGCCTT |
ss_oligo |
DNA |
Experimental |
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5509 |
Hs.42215 |
protein phosphatase 1, regulatory (inhibitor) subunit 3D |
PPP1R3D |
5509 |
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gene |
DNA |
PPP1R3D |
262 |
1 |
1 |
1 |
10 |
hSQ014117 |
Homo sapiens |
41.43 |
70 |
75 |
CATGCCTCTTTTGGAAAGATACCAGTTTTATCAACAACCTAGCGCATGTCACATCTCTGTCTAGATCTGA |
ss_oligo |
DNA |
Experimental |
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55033 |
Hs.571333 |
FK506 binding protein 14, 22 kDa |
FKBP14 |
55033 |
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gene |
DNA |
FKBP14 |
291 |
1 |
1 |
1 |
11 |
hSQ043020 |
Homo sapiens |
52.86 |
70 |
79 |
TTATGGAGGTGGTCCAGCACAGGTTCCACTACCTGGTGGCTTTCCTGGAGGACAGATGCCTTCTCAGTAT |
ss_oligo |
DNA |
Control |
control_tiling |
310 |
Hs.631827 |
Annexin A7 |
ANXA7 |
310 |
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gene |
DNA |
CONTROL |
320 |
1 |
1 |
1 |
12 |
hSQ027816 |
Homo sapiens |
44.29 |
70 |
76 |
GCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCA |
ss_oligo |
DNA |
Experimental |
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2017 |
Hs.632133 |
cortactin |
CTTN |
2017 |
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gene |
DNA |
CTTN |
349 |
1 |
1 |
1 |
13 |
hSQ031109 |
Homo sapiens |
27.14 |
70 |
69 |
GGGTAATTTTCATTAGTTGTTTTATTTGTTTTGATTTGAAACCTAATTTGACTGTTTAAAATGTTGGCCA |
ss_oligo |
DNA |
Experimental |
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284441 |
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actin-related protein 2 pseudogene |
LOC284441 |
284441 |
XM_208204 |
mRNA |
RNA |
LOC284441 |
378 |
1 |
1 |
1 |
14 |
hSQ030164 |
Homo sapiens |
47.14 |
70 |
77 |
GGCTAGGTTCGGCGATTTTACTTTAAGGGGTTCAGCCTCAACCTAAGATCCACATGGAGTTGCTGTTACA |
ss_oligo |
DNA |
Experimental |
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miRNA_miR-194 |
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miRNA_miR-194 |
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miRNA_miR-194 |
gene |
DNA |
miRNA_miR-194 |
407 |
1 |
1 |
1 |
15 |
hSQ018611 |
Homo sapiens |
45.71 |
70 |
76 |
CGGTGTGTTTTGATATGAAAACTCTCATGAATAAACATCTCCGTGAAACGCCAAGGCCCTCGTCAAACCC |
ss_oligo |
DNA |
Experimental |
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51529 |
Hs.534456 |
APC11 anaphase promoting complex subunit 11 homolog (yeast) |
ANAPC11 |
51529 |
NM_001002244 |
gene |
DNA |
ANAPC11 |
436 |
1 |
1 |
1 |
16 |
hSQ036804 |
Homo sapiens |
32.86 |
70 |
71 |
TCACCTTTGACTATGAACAAGTAACGGTAACATTCCTTTTGTGTATTCAATAATGCAGTTAGTTTACCTT |
ss_oligo |
DNA |
Experimental |
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283852 |
Hs.461131 |
cytochrome b5 type B (outer mitochondrial membrane) |
LOC283852 |
283852 |
AK098148 |
gene |
DNA |
LOC283852 |
465 |
1 |
1 |
1 |
17 |
hSQ025977 |
Homo sapiens |
42.86 |
70 |
75 |
GCAGCATTGCTGTTGATATTAGTGAGAATCTGAAGGAGAAGAAAACAGATGCTAAGCAGCAAGTGTCAGG |
ss_oligo |
DNA |
Experimental |
|
10557 |
Hs.94986 |
Ribonuclease P/MRP 38kDa subunit |
RPP38 |
10557 |
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gene |
DNA |
RPP38 |
494 |
1 |
1 |
1 |
18 |
hSQ033047 |
Homo sapiens |
32.86 |
70 |
71 |
GTCTTTTGTGCTACAGTTTCGTAGCATGAGTTTAAATCAAGATTATGATGAGTAAATGTGTATGGGTTAA |
ss_oligo |
DNA |
Experimental |
|
5591 |
Hs.695981 |
protein kinase, DNA-activated, catalytic polypeptide |
PRKDC |
5591 |
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gene |
DNA |
PRKDC |
523 |
1 |
1 |
1 |
19 |
hSQ031020 |
Homo sapiens |
54.29 |
70 |
80 |
GGGGGACATATGGTGGAAAACCATGATGGAGCTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCACCTT |
ss_oligo |
DNA |
Experimental |
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9436 |
Hs.194721 |
Natural cytotoxicity triggering receptor 2 |
NCR2 |
9436 |
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gene |
DNA |
NCR2 |
552 |
1 |
1 |
1 |
20 |
hSQ033883 |
Homo sapiens |
35.71 |
70 |
72 |
GTGTTGTGCCTACTTAATTCTGATAAACCTGTCTAAGCAATACTTAGGAGGCTTACTTCTTTGGATTAAA |
ss_oligo |
DNA |
Experimental |
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28955 |
Hs.592051 |
Dexamethasone-induced transcript |
DEXI |
28955 |
NM_014015 |
gene |
DNA |
DEXI |
Total number of rows: 44544
Table truncated, full table size 10025 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GPL9497_Print_1529.adf.gz |
4.1 Mb |
(ftp)(http) |
ADF |
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