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Platform GPL9851 Query DataSets for GPL9851
Status Public on Jan 06, 2010
Title ABI Human Genome Survey Microarray v.1
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Applied Biosystems
Manufacture protocol http://www3.appliedbiosystems.com/sup/URLRedirect/index.htm?xDoD=4338853
 
 
Submission date Jan 04, 2010
Last update date Jan 06, 2010
Contact name Mads Aarhus
E-mail(s) mads.aarhus@helse-bergen.no
Phone 99390832
Fax 99390832
Organization name Haukeland University Hospital
Department Center for Medical Genetics and Molecular Medicine
Street address Jonas Lies v 65
City Bergen
ZIP/Postal code 5021
Country Norway
 
Samples (106) GSM492634, GSM492635, GSM492636, GSM492637, GSM492638, GSM492639 
Series (4)
GSE19727 Molecular profiling of temporal fossa arachnoid cysts
GSE34722 Gene expression profiling of Acute Myeloid Leukemia (AML) samples
GSE37021 Gene expression profiling in Acute Myeloid Leukemia (AML)

Data table header descriptions
ID ABI Probe ID
GENE_ID Celera Gene ID
Gene_Symbol Official gene symbol
Gene_Name
Primary_Gene_ID
Cytoband
Panther_Process
GO_Biological_Process
GO_Molecular_Function
GO_Cellular_Component
OMIM
PubMed
Panther_Family_Name
Panther_Subfamily_Name
Panther_Function
Target_GenBank_mRNA
Proteins of Target RefSeqs (NPs)
Target RefSeqs
UniGene ID
GB_LIST GenBank Accession number
SPOT_ID temp

Data table
ID GENE_ID Gene_Symbol Gene_Name Primary_Gene_ID Cytoband Panther_Process GO_Biological_Process GO_Molecular_Function GO_Cellular_Component OMIM PubMed Panther_Family_Name Panther_Subfamily_Name Panther_Function Target_GenBank_mRNA Proteins of Target RefSeqs (NPs) Target RefSeqs UniGene ID GB_LIST SPOT_ID
176158 hCG1747652.1 37135 septin 1 1731 16p11.1 Cell cycle|Cytokinesis|Mitosis GO:0051301:cell division|GO:0007049:cell cycle GO:0005515:protein binding|GO:0000166:nucleotide binding|GO:0005525:GTP binding null null 12477932|9811347|2174398|8697812|16179162 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR590264|CR594519|CR603276|CR604490|CR606716|CR610165|CR615337|CR622773|AL833004|BC012161|AY034176|AF085235 NP_443070.1 NM_052838 Hs.511897 NM_052838, CR590264, CR594519, CR603276, CR604490, CR606716, CR610165, CR615337, CR622773, AL833004, BC012161, AY034176, AF085235
144621 hCG1820508.1 37316 methionine-tRNA synthetase 2 (mitochondrial) 92935 2q33.1 Amino acid activation|Protein metabolism and modification null null null 609728 12477932|14702039|15274629 ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES METHIONINE-TRNA SYNTHETASE Aminoacyl-tRNA synthetase;Ligase|Synthase and synthetase|Synthetase AB107013|BC009115|BC026361|BC040934|AK098121 NP_612404.1 NM_138395 Hs.116602 NM_138395, AB107013, BC009115, BC026361, BC040934, AK098121
187709 hCG1818618.1 37347 null 23591 17q21.31 null GO:0006915:apoptosis|GO:0000004:biological process unknown|GO:0006118:electron transport GO:0005554:molecular function unknown|GO:0005489:electron transporter activity|GO:0005507:copper ion binding GO:0008372:cellular component unknown null 10948432|12477932 null null null AF143236|BC069097 XP_498424.1|XP_499554.1 XM_498424|XM_499554 Hs.567434 XM_498424, XM_499554, AF143236, BC069097
200995 hCG2013444.1 37500 septin 2 4735 2q37 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0007049:cell cycle GO:0005515:protein binding|GO:0003924:GTPase activity|GO:0000166:nucleotide binding|GO:0005525:GTP binding GO:0005826:contractile ring 601506 10321247|8697812|12388755|15774761|12477932|9847074|9811347|9203580|12125979|9655500|14531065|8590280 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR589975|CR625560|D63878|AF038404|BX648000|BC014455 NP_004395.1|NP_001008491.1|NP_006146.1|NP_001008492.1 NM_001008491|NM_001008492|NM_006155|NM_004404 Hs.335057 NM_001008491, NM_001008492, NM_006155, NM_004404, CR589975, CR625560, D63878, AF038404, BX648000, BC014455
211188 hCG2013444.1 37500 septin 2 4735 2q37 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0007049:cell cycle GO:0005515:protein binding|GO:0003924:GTPase activity|GO:0000166:nucleotide binding|GO:0005525:GTP binding GO:0005826:contractile ring 601506 15774761|12477932|9847074|10321247|9811347|9203580|12125979|9655500|8697812|14531065|12388755|8590280 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR589975|CR625560|D63878|D28540|AF038404|BX648000|BC014455|BC033559 NP_004395.1|NP_001008491.1|NP_006146.1|NP_001008492.1 NM_001008491|NM_001008492|NM_006155|NM_004404 Hs.335057 NM_001008491, NM_001008492, NM_006155, NM_004404, CR589975, CR625560, D63878, D28540, AF038404, BX648000, BC014455, BC033559
205523 hCG41559.3 37865 septin 3 55964 22q13.2 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0007049:cell cycle GO:0000166:nucleotide binding|GO:0005554:molecular function unknown|GO:0005525:GTP binding GO:0008372:cellular component unknown 608314 15461802|15107017|11322766|8889548|15485489 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR604795|CR611488|CR616689|CR618252|AL833942|AF285107|AF285108|AF285109|CR456572|AB209152 NP_663787.1|NP_663786.1|NP_061979.2 NM_145733|NM_145734|NM_019106 Hs.120483 NM_145733, NM_145734, NM_019106, CR604795, CR611488, CR616689, CR618252, AL833942, AF285107, AF285108, AF285109, CR456572, AB209152
135917 hCG30696.2 38231 septin 4 5414 17q22-q23 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0042981:regulation of apoptosis|GO:0007049:cell cycle GO:0003924:GTPase activity|GO:0000166:nucleotide binding|GO:0005198:structural molecule activity|GO:0005525:GTP binding GO:0005634:nucleus|GO:0005739:mitochondrion 603696 10340703|11167005|11146656|12477932|14702039|15029247|9889007|15122323|11511094|12032658|12695511|15837787|15214843|14559152|15116257 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR603899|AX746762|AF035811|AF073312|U88829|U88870|AF176379|AB002110|BC018056|BC018055|AK091065|AK094579 NP_004565.1|NP_536341.1|NP_536342.1|NP_536340.1 NM_080415|NM_080416|NM_080417|NM_004574 Hs.287518 NM_080415, NM_080416, NM_080417, NM_004574, CR603899, AX746762, AF035811, AF073312, U88829, U88870, AF176379, AB002110, BC018056, BC018055, AK091065, AK094579
198319 hCG2002594 38596 septin 5 5413 22q11.21 Cell cycle|Cytokinesis|Mitosis GO:0017157:regulation of exocytosis|GO:0000910:cytokinesis|GO:0016080:synaptic vesicle targeting|GO:0007049:cell cycle GO:0005515:protein binding|GO:0003924:GTPase activity|GO:0000166:nucleotide binding|GO:0005198:structural molecule activity|GO:0005525:GTP binding GO:0005886:plasma membrane|GO:0008021:synaptic vesicle 602724 11078524|15461802|11146656|9385360|12477932|14702039|15231747|9022087|9760144|16179808|10321247|8021244|9600980|9655500|12909369|15214843|11880646|14530399|12023038|9611266|15116257 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR597468|CR598470|CR601109|CR603626|CR605683|CR608884|CR608991|CR609437|CR610263|CR619352|CR621875|Y11593|U59632|U59632|U74628|CR456545|AB209168|AK056273|BC025261 NP_001009939.1|NP_002679.2 NM_001009939|NM_002688 Hs.283743 NM_001009939, NM_002688, CR597468, CR598470, CR601109, CR603626, CR605683, CR608884, CR608991, CR609437, CR610263, CR619352, CR621875, Y11593, U59632, U59632, U74628, CR456545, AB209168, AK056273, BC025261
127713 hCG23191.4 38961 septin 6 23157 Xq24 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0007049:cell cycle GO:0005515:protein binding|GO:0000166:nucleotide binding|GO:0005525:GTP binding GO:0008372:cellular component unknown null 12477932|11064363|11809673|14531065|12096348|10744683|12388755|8590280 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR607912|CR614657|AL833677|D50918|BC009291|AY034177|BC036240|AF403059 NP_055944.2|NP_665799.1 NM_015129|NM_145799 Hs.496666 NM_015129, NM_145799, CR607912, CR614657, AL833677, D50918, BC009291, AY034177, BC036240, AF403059
122775 hCG23191.4 38961 septin 6 23157 Xq24 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0007049:cell cycle GO:0005515:protein binding|GO:0000166:nucleotide binding|GO:0005525:GTP binding GO:0008372:cellular component unknown null 12477932|11064363|11809673|14531065|12096348|10744683|12388755|8590280 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR607912|CR610105|D50918|BC009291|BC011922|BC069231|AY679521|AY034177|AF512943|AF512945|AF512946|BC036240|AF397023|AY005981|AF403058|AF403059|AF403060|AF403061|AF403062 NP_055944.2|NP_665799.1|NP_665801.1|NP_665798.1 NM_015129|NM_145799|NM_145800|NM_145802 Hs.496666 NM_015129, NM_145799, NM_145800, NM_145802, CR607912, CR610105, D50918, BC009291, BC011922, BC069231, AY679521, AY034177, AF512943, AF512945, AF512946, BC036240, AF397023, AY005981, AF403058, AF403059, AF403060, AF403061, AF403062
185881 hCG2010207 39326 septin 7 989 7p14.3-p14.1 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0051291:protein heterooligomerization|GO:0007049:cell cycle GO:0005515:protein binding|GO:0000166:nucleotide binding|GO:0005198:structural molecule activity|GO:0005525:GTP binding GO:0001725:stress fiber|GO:0005634:nucleus 603151 12477932|11584266|15485874|8037772|10931866|9655500|14531065|12388755 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein AL050392|CR609589|CR623918|CR625618|BX571755|BC022442|S72008|BC067264|AB209677|BX648365|BC025987|AB073389 NP_001779.2|NP_001011553.1 NM_001788|NM_001011553 Hs.191346 NM_001788, NM_001011553, AL050392, CR609589, CR623918, CR625618, BX571755, BC022442, S72008, BC067264, AB209677, BX648365, BC025987, AB073389
234736 hCG2010207 39326 septin 7 989 7p14.3-p14.1 Cell cycle|Cytokinesis|Mitosis GO:0000910:cytokinesis|GO:0051291:protein heterooligomerization|GO:0007049:cell cycle GO:0005515:protein binding|GO:0000166:nucleotide binding|GO:0005198:structural molecule activity|GO:0005525:GTP binding GO:0001725:stress fiber|GO:0005634:nucleus 603151 12477932|11584266|15485874|8037772|10931866|9655500|14531065|12388755 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR591983|CR593525|CR598145|CR609589|CR623918|BX571755|S72008|BC067264|AB209677|BC025987|BC093640|BC093642|AK223225|AK223241|AB073389 NP_001779.2|NP_001011553.1 NM_001788|NM_001011553 Hs.191346 NM_001788, NM_001011553, CR591983, CR593525, CR598145, CR609589, CR623918, BX571755, S72008, BC067264, AB209677, BC025987, BC093640, BC093642, AK223225, AK223241, AB073389
137300 hCG24127.3 39692 septin 8 23176 5q31 Cell cycle|Cytokinesis|Mitosis GO:0007049:cell cycle GO:0000166:nucleotide binding|GO:0005525:GTP binding null 608418 12098780|12477932|9149945|9039502|12475938|10704283|12909369|15214843|12023038|15116257 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein CR590471|CR617026|D86957|AF179995|BC001329|AK057797|AF440761|AF440762|AF440763 XP_034872.5 XM_034872 Hs.567428 XM_034872, CR590471, CR617026, D86957, AF179995, BC001329, AK057797, AF440761, AF440762, AF440763
188480 hCG1986631 40057 septin 9 10801 17q25 Cell cycle|Cytokinesis|Mitosis null null null 604061 16186812|10673329|12477932|14702039|10339604|10231032|12626509|15485874|12095151|12388755|11593400|15782116|10485469|10673328 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein AK027069 null null Hs.306900 AK027069
164771 hCG1986631 40057 septin 9 10801 17q25 Cell cycle|Cytokinesis|Mitosis null null null 604061 10673329|10231032|12388755|10673328|16186812|12477932|14702039|10339604|12626509|15485874|12095151|11593400|15782116|10485469 SEPTIN null Other cytoskeletal proteins;Select regulatory molecule|G-protein|Small GTPase|Cytoskeletal protein AB023208|AF123052|AF189712|AK022493|AJ312319|AJ312320|AJ312321|AJ312322|AF142408|AK056495|BC021192|AF189713|BC054004|BT007215 NP_006631.1 NM_006640 Hs.440932 NM_006640, AB023208, AF123052, AF189712, AK022493, AJ312319, AJ312320, AJ312321, AJ312322, AF142408, AK056495, BC021192, AF189713, BC054004, BT007215
216138 hCG1814734.1 MARCH1 membrane-associated ring finger (C3HC4) 1 55016 4q32.2 Proteolysis;Immunity and defense|Protein metabolism and modification GO:0016567:protein ubiquitination GO:0046872:metal ion binding|GO:0004842:ubiquitin-protein ligase activity|GO:0008270:zinc ion binding GO:0005634:nucleus|GO:0000151:ubiquitin ligase complex null 14722266 MEMBRANE ASSOCIATED RING FINGER MEMBRANE ASSOCIATED RING FINGER 1,8 Ligase|Ubiquitin-protein ligase AK000675 null null Hs.136900 AK000675
110819 hCG23964.3 MARCH2 membrane-associated ring finger (C3HC4) 2 51257 19p13.2 Proteolysis|Protein metabolism and modification GO:0016567:protein ubiquitination GO:0046872:metal ion binding|GO:0004842:ubiquitin-protein ligase activity|GO:0008270:zinc ion binding GO:0016021:integral to membrane|GO:0000151:ubiquitin ligase complex null 12477932|14722266|15689499|8619474|9110174|11042152 MEMBRANE ASSOCIATED RING FINGER MEMBRANE ASSOCIATED RING FINGER 2 Ligase|Ubiquitin-protein ligase AF151074|AB197929|BC015910|AK130163|BC032624 NP_057580.3|NP_001005416.1|NP_001005415.1 NM_016496|NM_001005415|NM_001005416 Hs.445113 NM_016496, NM_001005415, NM_001005416, AF151074, AB197929, BC015910, AK130163, BC032624
204932 hCG1981116.1 MARCH3 membrane-associated ring finger (C3HC4) 3 115123 5q23.2 Proteolysis|Protein metabolism and modification GO:0016567:protein ubiquitination GO:0046872:metal ion binding|GO:0004842:ubiquitin-protein ligase activity|GO:0008270:zinc ion binding GO:0016021:integral to membrane|GO:0000151:ubiquitin ligase complex null 12477932|14722266|8619474|9110174 MEMBRANE ASSOCIATED RING FINGER MEMBRANE ASSOCIATED RING FINGER 2 Ligase|Ubiquitin-protein ligase AF055007|BC047569 NP_848545.1 NM_178450 Hs.132441 NM_178450, AF055007, BC047569
106201 hCG28258.2 MARCH3 membrane-associated ring finger (C3HC4) 3 115123 5q23.2 Proteolysis|Protein metabolism and modification GO:0016567:protein ubiquitination GO:0046872:metal ion binding|GO:0004842:ubiquitin-protein ligase activity|GO:0008270:zinc ion binding GO:0016021:integral to membrane|GO:0000151:ubiquitin ligase complex null 14722266|9110174|12477932|8619474 MEMBRANE ASSOCIATED RING FINGER MEMBRANE ASSOCIATED RING FINGER 2 Ligase|Ubiquitin-protein ligase AF055007 null null Hs.132441 AF055007
118163 hCG16382.2 MARCH4 membrane-associated ring finger (C3HC4) 4 57574 2q35 null GO:0016567:protein ubiquitination GO:0046872:metal ion binding|GO:0004842:ubiquitin-protein ligase activity|GO:0008270:zinc ion binding GO:0016021:integral to membrane|GO:0000151:ubiquitin ligase complex 608208 12477932|14722266|10718198 null null null BC048793|BC098448|AB037820 NP_065865.1 NM_020814 Hs.170388 NM_020814, BC048793, BC098448, AB037820

Total number of rows: 33096

Table truncated, full table size 16151 Kbytes.




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