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Series GSE104248 Query DataSets for GSE104248
Status Public on Dec 30, 2021
Title Towards an integrative map of a single cell type's transcription factor landscape
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
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Submission date Sep 26, 2017
Last update date Dec 31, 2021
Contact name Eric M Mendenhall
Organization name HudsonAlpha Institute
Lab Mendenhall Lab
Street address 601 Genome Way Northwest
City Huntsville
State/province AL
ZIP/Postal code 35806
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (16)
GSM2793708 HepG2 WGBS rep1
GSM2793709 HepG2 WGBS rep2
GSM2793710 JunD rep1
This SuperSeries is composed of the following SubSeries:
GSE104245 Whole genome methylation profiling in HepG2 cells using WGBS (Whole Genome Bisulfite Sequencing)
GSE104246 DNA methylation profiling of TF bound sites using ChIPBS (ChIP Bisulfite Sequencing)
BioProject PRJNA412590

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104248_RAW.tar 2.2 Gb (http)(custom) TAR (of BEDGRAPH, COV)
SRA Run SelectorHelp

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