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| Status |
Public on Aug 15, 2018 |
| Title |
Small RNA sequencing facilitates quantitative miRNA analysis of fetal and maternal placental tissue in IUGR bovine fetuses |
| Organism |
Bos taurus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
Small RNA next generation sequencing and quantitative PCR revealed placental tissue-specific expression of the miR-4321, known to regulate many genes involved in early fetal development. This study also indicated that maternal and fetal components of the placenta respond differently to a deleterious fetal mutation.
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| Overall design |
Maternal and fetal placenta samples were collected from cows gestating MIMT1Del/WT fetuses and cows gestating wild-type fetuses terminated on the 94th ± 12 day of pregnancy
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| Contributor(s) |
Flisikowski K, Stachowiak M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Aug 14, 2018 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Krzysztof Flisikowski |
| E-mail(s) |
flisikowski@wzw.tum.de
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| Organization name |
Technical University of Munich
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| Department |
Livestock Biotechnology
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| Street address |
Liesel-Beckmannstr. 1
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| City |
Freising |
| ZIP/Postal code |
85354 |
| Country |
Germany |
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| Platforms (1) |
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| Samples (24)
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| GSM3331302 |
CASE, fetal placenta (C17_cot) |
| GSM3331303 |
CASE, fetal placenta (C18_cot) |
| GSM3331304 |
CONTROL, fetal placenta (C19_cot) |
| GSM3331305 |
CONTROL, fetal placenta (C20_cot) |
| GSM3331306 |
CONTROL, fetal placenta (C22_cot) |
| GSM3331307 |
CONTROL, fetal placenta (C23_cot) |
| GSM3331308 |
CASE, fetal placenta (C24_cot) |
| GSM3331309 |
CASE, fetal placenta (C25_cot) |
| GSM3331310 |
CONTROL, fetal placenta (C26_cot) |
| GSM3331311 |
CONTROL, maternal placenta (C13_car) |
| GSM3331312 |
CONTROL, maternal placenta (C14_car) |
| GSM3331313 |
CASE, maternal placenta (C15_car) |
| GSM3331314 |
CASE, maternal placenta (C17_car) |
| GSM3331315 |
CASE, maternal placenta (C18_car) |
| GSM3331316 |
CONTROL, maternal placenta (C19_car) |
| GSM3331317 |
CONTROL, maternal placenta (C20_car) |
| GSM3331318 |
CONTROL, maternal placenta (C22_car) |
| GSM3331319 |
CONTROL, maternal placenta (C23_car) |
| GSM3331320 |
CASE, maternal placenta (C24_car) |
| GSM3331321 |
CASE, maternal placenta (C25_car) |
| GSM3331322 |
CONTROL, maternal placenta (C26_car) |
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| Relations |
| BioProject |
PRJNA485880 |
| SRA |
SRP157882 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE118510_stillbirth_foetal_isomiR_20180622.xlsx |
925.2 Kb |
(ftp)(http) |
XLSX |
| GSE118510_stillbirth_maternal_isomiR_20180514.xlsx |
886.6 Kb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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