|
| Status |
Public on Jun 30, 2021 |
| Title |
Preformed aerenchyma determines the differential tolerance response under partial submergence imposed by fresh and saline water flooding in rice |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this project we are investigating the differential mechanism of tolerance in rice under combined stresses of salinity and partial submergence as encountered during saline water flooding by looking into expression profile of DEGs and uniquely expressed genes.
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| |
|
| Overall design |
12 Rice plants were grown under fresh and saline water flooding conditions.
|
| Web link |
https://pubmed.ncbi.nlm.nih.gov/34431099/
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| |
|
| Contributor(s) |
Chakraborty K |
| Citation(s) |
34431099 |
| |
| Submission date |
Jan 03, 2019 |
| Last update date |
Sep 30, 2021 |
| Contact name |
Koushik Chakraborty |
| E-mail(s) |
koushikiari@gmail.com
|
| Organization name |
ICAR-National Rice Research Institute
|
| Street address |
Bidyadharpur
|
| City |
Cuttack |
| ZIP/Postal code |
753006 |
| Country |
India |
| |
|
| Platforms (1) |
| GPL19290 |
Illumina HiSeq 2500 (Oryza sativa) |
|
| Samples (12)
|
| GSM3537992 |
Varshadhan Biological Rep 1 (Waterlogging + Salinity) |
| GSM3537993 |
Varshadhan Biological Rep 2 (Waterlogging + Salinity) |
| GSM3537994 |
Rashpanjor Biological Rep 1 (Waterlogging + Salinity) |
| GSM3537995 |
Rashpanjor Biological Rep 2 (Waterlogging + Salinity) |
| GSM3537996 |
Varshadhan Biological Rep 1 (Control) |
| GSM3537997 |
Varshadhan Biological Rep 2 (Control) |
| GSM3537998 |
Rashpanjor Biological Rep 1 (Control) |
| GSM3537999 |
Rashpanjor Biological Rep 2 (Control) |
| GSM3538000 |
Varshadhan Biological Rep 1 (Waterlogging) |
| GSM3538001 |
Varshadhan Biological Rep 2 (Waterlogging) |
| GSM3538002 |
Rashpanjor Biological Rep 1 (Waterlogging) |
| GSM3538003 |
Rashpanjor Biological Rep 2 (Waterlogging) |
|
| Relations |
| BioProject |
PRJNA512854 |
| SRA |
SRP175167 |
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