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GEO accession:
Series GSE130546
Query DataSets for GSE130546
Status
Public on Dec 01, 2019
Title
The zinc finger protein CLAMP promotes long-range chromatin interactions that mediate dosage compensation of the Drosophila male X-chromosome
Organism
Drosophila melanogaster
Experiment type
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
May 01, 2019
Last update date
Dec 03, 2019
Contact name
Erica Larschan
E-mail(s)
Erica_Larschan@brown.edu
Organization name
Brown University
Street address
185 Meeting St.
City
Providence
ZIP/Postal code
02912
Country
USA
Platforms (1)
GPL17275
Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (36)
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More...
GSM3742012
4C-seq: gfp RNAi CES viewpoint1 rep1
GSM3742013
4C-seq: gfp RNAi CES viewpoint1 rep2
GSM3742014
4C-seq: trl RNAi CES viewpoint1 rep1
GSM3742015
4C-seq: trl RNAi CES viewpoint1 rep2
GSM3742016
4C-seq: msl2 RNAi CES viewpoint1 rep1
GSM3742017
4C-seq: msl2 RNAi CES viewpoint1 rep2
GSM3742018
4C-seq: clamp RNAi CES viewpoint1 rep1
GSM3742019
4C-seq: clamp RNAi CES viewpoint1 rep2
GSM3742020
4C-seq: gfp RNAi CES viewpoint2 rep1
GSM3742021
4C-seq: gfp RNAi CES viewpoint2 rep2
GSM3742022
4C-seq: trl RNAi CES viewpoint2 rep1
GSM3742023
4C-seq: trl RNAi CES viewpoint2 rep2
GSM3742024
4C-seq: msl2 RNAi CES viewpoint2 rep1
GSM3742025
4C-seq: msl2 RNAi CES viewpoint2 rep2
GSM3742026
4C-seq: clamp RNAi CES viewpoint2 rep1
GSM3742027
4C-seq: clamp RNAi CES viewpoint2 rep2
GSM3742028
4C-seq: gfp RNAi CES viewpoint3 rep1
GSM3742029
4C-seq: gfp RNAi CES viewpoint3 rep2
GSM3742030
4C-seq: trl RNAi CES viewpoint3 rep1
GSM3742031
4C-seq: trl RNAi CES viewpoint3 rep2
GSM3742032
4C-seq: msl2 RNAi CES viewpoint3 rep1
GSM3742033
4C-seq: msl2 RNAi CES viewpoint3 rep2
GSM3742034
4C-seq: clamp RNAi CES viewpoint3 rep1
GSM3742035
4C-seq: clamp RNAi CES viewpoint3 rep2
GSM3742036
4C-seq: gfp RNAi CES viewpoint4 rep1
GSM3742037
4C-seq: gfp RNAi CES viewpoint4 rep2
GSM3742038
4C-seq: trl RNAi CES viewpoint4 rep1
GSM3742039
4C-seq: trl RNAi CES viewpoint4 rep2
GSM3742040
4C-seq: msl2 RNAi CES viewpoint4 rep1
GSM3742041
4C-seq: msl2 RNAi CES viewpoint4 rep2
GSM3742042
4C-seq: clamp RNAi CES viewpoint4 rep1
GSM3742043
4C-seq: clamp RNAi CES viewpoint4 rep2
GSM3742044
Hi-C: gfp RNAi rep1
GSM3742045
Hi-C: gfp RNAi rep2
GSM3742046
Hi-C: clamp RNAi rep1
GSM3742047
Hi-C: clamp RNAi rep2
This SuperSeries is composed of the following SubSeries:
GSE130544
The zinc finger protein CLAMP promotes long-range chromatin interactions that mediate dosage compensation of the Drosophila male X-chromosome [4C-seq]
GSE130545
The zinc finger protein CLAMP promotes long-range chromatin interactions that mediate dosage compensation of the Drosophila male X-chromosome [Hi-C seq]
Relations
BioProject
PRJNA540589
Download family
Format
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SOFT
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TXT
Supplementary file
Size
Download
File type/resource
GSE130546_RAW.tar
289.0 Mb
(http)
(custom)
TAR (of BEDGRAPH, HIC)
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