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Series GSE148098 Query DataSets for GSE148098
Status Public on Sep 10, 2020
Title How to Make an Elephant: Functional Genomic Divergence and the Evolution of Cancer Suppression
Organism Loxodonta africana
Experiment type Expression profiling by high throughput sequencing
Summary Contrast the genomes of different elephants species to find genetic differences underlying species differences like immune system differences that impact disease resistance.
 
Overall design Define genes that are differentially expressed between Asian and African Elephants. The Asian elephant is in the SRA database under SRP065915 and BioProject PRJNA301482.
 
Contributor(s) Tollis M, Abegglen L, Ferris E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 05, 2020
Last update date Sep 10, 2020
Contact name Chris Gregg
E-mail(s) chris.gregg@neuro.utah.edu
Organization name University of Utah
Department Neurobiology and Anatomy
Lab Chris Gregg Lab
Street address 20 South 2030 East
City Salt Lake City
State/province UT
ZIP/Postal code 84112
Country USA
 
Platforms (1)
GPL18016 Illumina HiSeq 2000 (Loxodonta africana)
Samples (4)
GSM4454073 African Bush Elephant PBMC 1
GSM4454074 African Bush Elephant PBMC 3
GSM4454075 African Bush Elephant PBMC 7
Relations
BioProject PRJNA623216
SRA SRP255306

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE148098_counts_elephant19.txt.gz 212.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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