|
| Status |
Public on Dec 31, 2021 |
| Title |
Transcriptomic reprograming during the involution of brown adipose tissue in rabbits |
| Organism |
Oryctolagus cuniculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Brown adipose tissue (BAT) in rabbits undergoes rapid involution, i.e. transforming to white adipose tissue (WAT), similarly to what happens in humans. We aim to profile the transcriptomic changes of total BAT and the stromal vascular fraction (SVF) that contains adipocyte progenitors at the global and single-cell levels.
|
| |
|
| Overall design |
Bulk- and single cell-RNA sequencing of total and/or the SVF of the interscapular and/or subscapular BAT depots from rabbits at ages of 1 day, 3 weeks, 6 weeks, and 12 weeks.
|
| |
|
| Contributor(s) |
Ruan H, Huang Z |
| Citation(s) |
35417710 |
| |
| Submission date |
Apr 18, 2020 |
| Last update date |
Nov 30, 2022 |
| Contact name |
Hai-Bin Ruan |
| E-mail(s) |
hruan@umn.edu
|
| Phone |
6123017686
|
| Organization name |
University of Minnesota
|
| Department |
Integrative Biology and Physiology
|
| Street address |
2231 6th St SE, 3-143 CCRB
|
| City |
Minneapolis |
| State/province |
MN |
| ZIP/Postal code |
55455 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL26786 |
Illumina NovaSeq 6000 (Oryctolagus cuniculus) |
| GPL28431 |
BGISEQ-500 (Oryctolagus cuniculus) |
|
| Samples (39)
|
|
| Relations |
| BioProject |
PRJNA626356 |
| SRA |
SRP257235 |
Less...
More...